Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm25116-201ENSMUST00000157191 122 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm25438-201ENSMUST00000158281 110 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm3851-201ENSMUST00000168653 318 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm20526-201ENSMUST00000173416 158 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Mir6926-201ENSMUST00000184562 68 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm28594-201ENSMUST00000187022 661 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm18900-201ENSMUST00000193218 584 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm42832-201ENSMUST00000196361 745 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm43494-201ENSMUST00000197672 388 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm43814-201ENSMUST00000197851 413 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm42625-201ENSMUST00000198611 922 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm45327-201ENSMUST00000211612 565 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm20946-201ENSMUST00000212367 461 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm19599-201ENSMUST00000218898 358 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm12582-201ENSMUST00000030555 697 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm22868-201ENSMUST00000083955 164 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.03□□□□□ -1.93
Trav5d-4Q5R1F6 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
Trav5d-4Q5R1F6 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
Trav5d-4Q5R1F6 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 BC051076-202ENSMUST00000199477 2868 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm14991-201ENSMUST00000119913 598 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm12358-201ENSMUST00000121842 520 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm2892-201ENSMUST00000145537 711 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm22310-201ENSMUST00000157509 116 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm23782-201ENSMUST00000157939 120 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm22840-201ENSMUST00000158444 136 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm24666-201ENSMUST00000158937 167 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Mir3104-201ENSMUST00000174911 63 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm21816-201ENSMUST00000179255 360 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm37857-201ENSMUST00000191784 1199 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm37603-201ENSMUST00000192368 219 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm6680-201ENSMUST00000192789 950 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Trbv8-201ENSMUST00000194020 285 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm37495-201ENSMUST00000194590 264 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.02□□□□□ -1.93
Trav5d-4Q5R1F6 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Gm5762-201ENSMUST00000119204 258 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Gm14119-201ENSMUST00000119511 235 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Gm11483-201ENSMUST00000119839 247 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Gm18604-201ENSMUST00000172535 558 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Gm28155-201ENSMUST00000191066 151 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Gm18429-201ENSMUST00000198707 421 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Gm4501-201ENSMUST00000207330 551 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Gm4558-201ENSMUST00000207886 521 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Gm25480-201ENSMUST00000083217 133 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Mir346-201ENSMUST00000083547 98 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.01□□□□□ -1.93
Trav5d-4Q5R1F6 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trav5d-4Q5R1F6 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms