Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm38107-201ENSMUST00000194873 696 ntBASIC4.42□□□□□ -1.7
Trim58Q5NCC9 Gm38018-201ENSMUST00000195651 540 ntBASIC4.42□□□□□ -1.7
Trim58Q5NCC9 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim58Q5NCC9 Gm44016-201ENSMUST00000203463 164 ntBASIC4.42□□□□□ -1.7
Trim58Q5NCC9 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim58Q5NCC9 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim58Q5NCC9 Gm4057-201ENSMUST00000221407 368 ntBASIC4.42□□□□□ -1.7
Trim58Q5NCC9 AC154424.1-201ENSMUST00000225883 799 ntBASIC4.42□□□□□ -1.7
Trim58Q5NCC9 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Trim58Q5NCC9 Gm18422-202ENSMUST00000203798 2214 ntBASIC4.42□□□□□ -1.7
Trim58Q5NCC9 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Trim58Q5NCC9 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim58Q5NCC9 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Gm15783-201ENSMUST00000117521 633 ntBASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Gm22840-201ENSMUST00000158444 136 ntBASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Gm24111-201ENSMUST00000175491 97 ntBASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Gm19898-201ENSMUST00000177490 251 ntBASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Gm29513-201ENSMUST00000185741 202 ntBASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Gm44583-201ENSMUST00000207478 281 ntBASIC4.41□□□□□ -1.7
Trim58Q5NCC9 AC154184.2-201ENSMUST00000225335 349 ntBASIC4.41□□□□□ -1.7
Trim58Q5NCC9 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim58Q5NCC9 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Trim58Q5NCC9 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Gm14975-201ENSMUST00000118741 664 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Gm5123-201ENSMUST00000121905 837 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Gm13868-201ENSMUST00000122411 294 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.4□□□□□ -1.71
Trim58Q5NCC9 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Gm5755-201ENSMUST00000152394 837 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Gm25860-201ENSMUST00000158252 126 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Gm18595-201ENSMUST00000175736 1068 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Gm27315-201ENSMUST00000183977 154 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC4.4□□□□□ -1.71
Trim58Q5NCC9 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Gm9379-201ENSMUST00000196790 646 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Gm7587-201ENSMUST00000207618 1021 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Gm35405-201ENSMUST00000218754 400 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 AC167202.1-201ENSMUST00000219027 331 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Snord35b-201ENSMUST00000082833 87 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Gm42585-201ENSMUST00000198731 4020 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.4□□□□□ -1.71
Trim58Q5NCC9 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Gm15225-201ENSMUST00000120449 1017 ntBASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Gm13692-201ENSMUST00000120774 371 ntBASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Gm25105-201ENSMUST00000122477 130 ntBASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Gm28030-201ENSMUST00000184987 138 ntBASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Gm3489-201ENSMUST00000190083 528 ntBASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Gm44137-201ENSMUST00000203670 367 ntBASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Gm7119-201ENSMUST00000221345 695 ntBASIC4.39□□□□□ -1.71
Trim58Q5NCC9 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim58Q5NCC9 Gm37303-201ENSMUST00000194202 1559 ntBASIC4.39□□□□□ -1.71
Trim58Q5NCC9 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm14050-201ENSMUST00000117052 346 ntBASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm11260-201ENSMUST00000121163 942 ntBASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm13973-201ENSMUST00000121371 894 ntBASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm12226-201ENSMUST00000144172 876 ntBASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm23671-201ENSMUST00000157472 103 ntBASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm23540-201ENSMUST00000157543 164 ntBASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm4207-201ENSMUST00000173144 960 ntBASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Trim58Q5NCC9 Gm38332-201ENSMUST00000194189 147 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms