Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm46327-201ENSMUST00000218240 365 ntBASIC9.74□□□□□ -0.85
Trim41Q5NCC3 AC159621.1-201ENSMUST00000223249 163 ntBASIC9.74□□□□□ -0.85
Trim41Q5NCC3 AC113269.1-201ENSMUST00000227185 674 ntBASIC9.74□□□□□ -0.85
Trim41Q5NCC3 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC9.74□□□□□ -0.85
Trim41Q5NCC3 Gm6104-201ENSMUST00000078030 603 ntBASIC9.74□□□□□ -0.85
Trim41Q5NCC3 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Trim41Q5NCC3 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
Trim41Q5NCC3 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim41Q5NCC3 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim41Q5NCC3 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trim41Q5NCC3 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trim41Q5NCC3 Gm1966-201ENSMUST00000184540 7293 ntBASIC9.74□□□□□ -0.85
Trim41Q5NCC3 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim41Q5NCC3 AC156031.1-201ENSMUST00000217288 2555 ntBASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm44193-201ENSMUST00000204822 2523 ntBASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm25915-201ENSMUST00000104265 126 ntBASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm14774-201ENSMUST00000117857 536 ntBASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm14559-201ENSMUST00000121745 496 ntBASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm22843-201ENSMUST00000157710 134 ntBASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm4845-201ENSMUST00000179202 562 ntBASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm3145-201ENSMUST00000188584 220 ntBASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Igkv15-101-201ENSMUST00000195917 299 ntBASIC9.73□□□□□ -0.85
Trim41Q5NCC3 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm43393-201ENSMUST00000200147 194 ntBASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Glud-ps-201ENSMUST00000206310 657 ntBASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm44543-201ENSMUST00000209136 396 ntBASIC9.73□□□□□ -0.85
Trim41Q5NCC3 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm18487-201ENSMUST00000215826 878 ntBASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC9.73□□□□□ -0.85
Trim41Q5NCC3 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm15553-201ENSMUST00000118757 430 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm14930-201ENSMUST00000118864 652 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm2005-201ENSMUST00000120759 542 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm11677-201ENSMUST00000121349 977 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm23169-201ENSMUST00000157157 112 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm22037-201ENSMUST00000157280 296 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm7609-204ENSMUST00000161424 461 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm14527-201ENSMUST00000179300 639 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Mir409-201ENSMUST00000198153 79 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm18468-201ENSMUST00000207321 369 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm18470-201ENSMUST00000207467 420 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm18465-201ENSMUST00000207468 369 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm18464-201ENSMUST00000207803 420 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm18458-201ENSMUST00000207908 369 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm18461-201ENSMUST00000208421 420 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 AC160958.1-201ENSMUST00000224833 368 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 CT025604.1-201ENSMUST00000221111 3436 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm44678-201ENSMUST00000207828 2775 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm42662-201ENSMUST00000202539 1431 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Gm45520-201ENSMUST00000210109 2031 ntBASIC9.72□□□□□ -0.85
Trim41Q5NCC3 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.85
Trim41Q5NCC3 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trim41Q5NCC3 Gm44723-201ENSMUST00000207369 4000 ntBASIC9.71□□□□□ -0.85
Trim41Q5NCC3 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trim41Q5NCC3 Mir875-201ENSMUST00000104698 78 ntBASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Gm12427-201ENSMUST00000117719 302 ntBASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Gm12985-201ENSMUST00000118376 183 ntBASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Gm14013-201ENSMUST00000119006 270 ntBASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Gm14472-201ENSMUST00000119815 282 ntBASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Gm25348-201ENSMUST00000158961 111 ntBASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Gm27754-201ENSMUST00000183340 126 ntBASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Gm19641-201ENSMUST00000188432 417 ntBASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Gm18854-201ENSMUST00000211196 329 ntBASIC9.71□□□□□ -0.86
Trim41Q5NCC3 CT010455.1-201ENSMUST00000218579 413 ntBASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC9.71□□□□□ -0.86
Trim41Q5NCC3 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC9.71□□□□□ -0.86
Trim41Q5NCC3 AL606513.1-201ENSMUST00000225369 579 ntBASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Mir19a-201ENSMUST00000083482 82 ntBASIC9.71□□□□□ -0.86
Trim41Q5NCC3 n-R5s27-201ENSMUST00000093699 119 ntBASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC9.71□□□□□ -0.86
Trim41Q5NCC3 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim41Q5NCC3 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms