Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm16100-201ENSMUST00000120489 231 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm13430-201ENSMUST00000121366 288 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm7855-201ENSMUST00000137737 687 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm22186-201ENSMUST00000157822 122 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm23513-201ENSMUST00000158181 133 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm17155-201ENSMUST00000165969 473 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm23152-201ENSMUST00000175322 116 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm4842-201ENSMUST00000183237 835 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm28976-201ENSMUST00000188070 144 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm28926-201ENSMUST00000191063 680 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm43493-201ENSMUST00000199837 202 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm7041-201ENSMUST00000201227 524 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 AL929285.1-201ENSMUST00000215522 229 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 AC159244.1-201ENSMUST00000220964 594 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Snora31-201ENSMUST00000083213 130 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm25581-201ENSMUST00000083410 164 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm22826-201ENSMUST00000083774 165 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm14933-201ENSMUST00000118840 481 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm14600-201ENSMUST00000121032 630 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm12358-201ENSMUST00000121842 520 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm12103-201ENSMUST00000121892 362 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Zakit-201ENSMUST00000157677 308 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm26320-201ENSMUST00000157742 306 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm24224-201ENSMUST00000158828 258 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm16236-201ENSMUST00000159588 379 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm17061-201ENSMUST00000163167 499 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm27883-201ENSMUST00000183941 102 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm27805-201ENSMUST00000184513 79 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm27355-201ENSMUST00000185045 128 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm28267-201ENSMUST00000191093 265 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm18900-201ENSMUST00000193218 584 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm44387-201ENSMUST00000196298 145 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm44092-201ENSMUST00000204470 258 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm45081-201ENSMUST00000206281 572 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm33626-201ENSMUST00000206790 828 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 AC147639.1-201ENSMUST00000224216 661 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim40Q3UWA4 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms