Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Upf3aQ3ULJ3 Gm38234-201ENSMUST00000195204 421 ntBASIC3.9□□□□□ -1.79
Upf3aQ3ULJ3 Gm43090-201ENSMUST00000202459 314 ntBASIC3.9□□□□□ -1.79
Upf3aQ3ULJ3 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.9□□□□□ -1.79
Upf3aQ3ULJ3 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Upf3aQ3ULJ3 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Upf3aQ3ULJ3 Gm25800-201ENSMUST00000082636 134 ntBASIC3.9□□□□□ -1.79
Upf3aQ3ULJ3 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Upf3aQ3ULJ3 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Upf3aQ3ULJ3 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.9□□□□□ -1.79
Upf3aQ3ULJ3 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Upf3aQ3ULJ3 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Upf3aQ3ULJ3 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Upf3aQ3ULJ3 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Gm11408-201ENSMUST00000117889 519 ntBASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Gm12543-201ENSMUST00000120410 543 ntBASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Gm14559-201ENSMUST00000121745 496 ntBASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Gm16303-201ENSMUST00000161498 390 ntBASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Gm25535-201ENSMUST00000175364 125 ntBASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Gm44869-201ENSMUST00000208836 357 ntBASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Upf3aQ3ULJ3 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Gm13865-201ENSMUST00000120957 865 ntBASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Gm25432-201ENSMUST00000158284 66 ntBASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Gm5263-201ENSMUST00000163646 601 ntBASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Gm44513-201ENSMUST00000206811 439 ntBASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Upf3aQ3ULJ3 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm14825-201ENSMUST00000113538 701 ntBASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm24831-201ENSMUST00000116778 126 ntBASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm15148-201ENSMUST00000117602 156 ntBASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm9157-201ENSMUST00000117673 225 ntBASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm13687-201ENSMUST00000119857 282 ntBASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm24976-201ENSMUST00000158972 135 ntBASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm28148-201ENSMUST00000186924 697 ntBASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm19280-201ENSMUST00000190191 205 ntBASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm43894-201ENSMUST00000203274 688 ntBASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm44118-201ENSMUST00000204665 229 ntBASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm36776-201ENSMUST00000207006 203 ntBASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm44773-201ENSMUST00000207374 557 ntBASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf3aQ3ULJ3 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms