Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm28639-201ENSMUST00000191519 481 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm28724-202ENSMUST00000194218 295 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm44343-201ENSMUST00000196702 90 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm31520-201ENSMUST00000203048 733 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm5917-201ENSMUST00000217638 721 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm17917-201ENSMUST00000218561 953 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 AC167013.2-202ENSMUST00000227035 333 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm24144-201ENSMUST00000082632 111 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm22575-201ENSMUST00000082981 110 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm15103-201ENSMUST00000119893 871 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm23959-201ENSMUST00000157208 324 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm23587-201ENSMUST00000157658 84 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm24998-201ENSMUST00000157908 89 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm27445-201ENSMUST00000184484 72 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm5829-201ENSMUST00000191383 351 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm38214-201ENSMUST00000192581 988 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm18900-201ENSMUST00000193218 584 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm37993-201ENSMUST00000195301 988 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm6240-201ENSMUST00000208014 473 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 AC132104.1-201ENSMUST00000213615 260 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm18507-201ENSMUST00000218855 525 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 AC173345.3-201ENSMUST00000221245 1093 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm7099-201ENSMUST00000080066 554 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm5185-201ENSMUST00000080271 619 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm25481-201ENSMUST00000083221 158 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm25581-201ENSMUST00000083410 164 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trafd1Q3UDK1 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm27013-202ENSMUST00000205067 1436 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Mir706-201ENSMUST00000102262 84 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm11625-201ENSMUST00000119535 296 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm12587-201ENSMUST00000120180 427 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm12358-201ENSMUST00000121842 520 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm11403-201ENSMUST00000122195 369 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm26254-201ENSMUST00000122491 118 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm14368-201ENSMUST00000145305 415 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm25150-201ENSMUST00000157121 60 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm23782-201ENSMUST00000157939 120 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm22890-201ENSMUST00000158642 144 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm2389-201ENSMUST00000160487 189 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm16290-201ENSMUST00000161175 474 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Samd15-201ENSMUST00000169669 1194 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm44392-201ENSMUST00000196758 115 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm44088-201ENSMUST00000204595 237 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm45034-201ENSMUST00000206831 482 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm17987-201ENSMUST00000206902 603 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm5649-201ENSMUST00000217918 951 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm17829-201ENSMUST00000219782 344 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trafd1Q3UDK1 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms