Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm25134-201ENSMUST00000082646 160 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm22810-201ENSMUST00000082741 158 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Neat1-201ENSMUST00000173672 20771 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm37761-201ENSMUST00000194989 2098 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm25111-201ENSMUST00000116686 147 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm14575-201ENSMUST00000117210 560 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm14046-201ENSMUST00000119389 509 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm11719-201ENSMUST00000119399 351 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm14991-201ENSMUST00000119913 598 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm14619-201ENSMUST00000120480 168 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm13368-201ENSMUST00000122443 430 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm16254-201ENSMUST00000131528 730 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm23501-201ENSMUST00000157744 256 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm25185-201ENSMUST00000157754 96 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm22158-201ENSMUST00000158411 126 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm19932-201ENSMUST00000177033 313 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm28660-201ENSMUST00000186496 253 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm18667-201ENSMUST00000186523 484 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm29148-201ENSMUST00000188140 336 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm9227-201ENSMUST00000194733 566 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm37523-201ENSMUST00000194901 412 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm9238-201ENSMUST00000196181 329 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm43408-201ENSMUST00000198263 440 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm43675-201ENSMUST00000199468 1184 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm5176-202ENSMUST00000220267 583 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm25079-201ENSMUST00000082529 203 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm24706-201ENSMUST00000082806 137 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Usp39Q3TIX9 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC4.72□□□□□ -1.65
Usp39Q3TIX9 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gm25419-201ENSMUST00000104215 191 ntBASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gm24855-201ENSMUST00000104848 97 ntBASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gm14995-201ENSMUST00000117135 391 ntBASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gm14172-201ENSMUST00000118255 644 ntBASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gm14784-201ENSMUST00000121604 663 ntBASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gm22343-201ENSMUST00000122648 286 ntBASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Trbv10-201ENSMUST00000168322 289 ntBASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Usp39Q3TIX9 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gm9569-201ENSMUST00000187492 787 ntBASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Usp39Q3TIX9 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Mir6375-201ENSMUST00000197176 95 ntBASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gm45032-201ENSMUST00000205375 520 ntBASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gm18924-201ENSMUST00000211929 316 ntBASIC4.72□□□□□ -1.65
Usp39Q3TIX9 Gm5023-201ENSMUST00000217442 587 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms