Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm27773-201ENSMUST00000184087 78 ntBASIC3.18□□□□□ -1.9
H3f3aP84244 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
H3f3aP84244 Gm28148-201ENSMUST00000186924 697 ntBASIC3.18□□□□□ -1.9
H3f3aP84244 Gm37575-201ENSMUST00000195467 309 ntBASIC3.18□□□□□ -1.9
H3f3aP84244 Gm19243-201ENSMUST00000198592 269 ntBASIC3.18□□□□□ -1.9
H3f3aP84244 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.18□□□□□ -1.9
H3f3aP84244 Gm43922-201ENSMUST00000205071 328 ntBASIC3.18□□□□□ -1.9
H3f3aP84244 Gm3189-201ENSMUST00000205595 832 ntBASIC3.18□□□□□ -1.9
H3f3aP84244 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC3.18□□□□□ -1.9
H3f3aP84244 Gm44611-201ENSMUST00000207507 355 ntBASIC3.18□□□□□ -1.9
H3f3aP84244 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.18□□□□□ -1.9
H3f3aP84244 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.18□□□□□ -1.9
H3f3aP84244 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.18□□□□□ -1.9
H3f3aP84244 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.18□□□□□ -1.9
H3f3aP84244 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.18□□□□□ -1.9
H3f3aP84244 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
H3f3aP84244 BC051076-202ENSMUST00000199477 2868 ntBASIC3.18□□□□□ -1.9
H3f3aP84244 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
H3f3aP84244 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
H3f3aP84244 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
H3f3aP84244 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.18□□□□□ -1.9
H3f3aP84244 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
H3f3aP84244 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
H3f3aP84244 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.18□□□□□ -1.9
H3f3aP84244 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
H3f3aP84244 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
H3f3aP84244 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 Gm24792-201ENSMUST00000104286 128 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
H3f3aP84244 Gm14570-201ENSMUST00000119444 391 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 Gm13460-201ENSMUST00000121274 353 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
H3f3aP84244 Gm9890-201ENSMUST00000171867 537 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 Gm10074-201ENSMUST00000174543 249 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 Gm22108-201ENSMUST00000177961 106 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 Gm24798-201ENSMUST00000179334 106 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
H3f3aP84244 Gm6680-201ENSMUST00000192789 950 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
H3f3aP84244 Gm34005-201ENSMUST00000215834 282 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
H3f3aP84244 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
H3f3aP84244 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 Gm10242-201ENSMUST00000090064 330 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
H3f3aP84244 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
H3f3aP84244 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
H3f3aP84244 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.17□□□□□ -1.9
H3f3aP84244 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
H3f3aP84244 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
H3f3aP84244 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
H3f3aP84244 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
H3f3aP84244 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
H3f3aP84244 Gm26075-201ENSMUST00000104062 121 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.16□□□□□ -1.9
H3f3aP84244 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
H3f3aP84244 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 Gm16101-201ENSMUST00000160695 430 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 Gm23152-201ENSMUST00000175322 116 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
H3f3aP84244 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
H3f3aP84244 Gm27044-201ENSMUST00000183033 796 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 Mir6907-201ENSMUST00000183764 71 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 Mir6385-201ENSMUST00000184295 105 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 Gm27445-201ENSMUST00000184484 72 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.16□□□□□ -1.9
H3f3aP84244 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
H3f3aP84244 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.16□□□□□ -1.9
H3f3aP84244 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
H3f3aP84244 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.16□□□□□ -1.9
H3f3aP84244 Gm29704-201ENSMUST00000196011 253 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 Gm42832-201ENSMUST00000196361 745 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 Gm42758-201ENSMUST00000202146 283 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
H3f3aP84244 Gm7380-201ENSMUST00000211599 466 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.16□□□□□ -1.9
H3f3aP84244 AC129323.1-201ENSMUST00000216733 470 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.16□□□□□ -1.9
H3f3aP84244 Gm4052-201ENSMUST00000220890 451 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
H3f3aP84244 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
H3f3aP84244 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
H3f3aP84244 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
H3f3aP84244 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.16□□□□□ -1.9
H3f3aP84244 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
H3f3aP84244 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
H3f3aP84244 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
H3f3aP84244 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.15□□□□□ -1.9
H3f3aP84244 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms