Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb1P63158 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm14909-201ENSMUST00000117853 351 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm13454-201ENSMUST00000118166 483 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm13314-201ENSMUST00000118742 335 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm11896-201ENSMUST00000121105 820 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm8080-201ENSMUST00000122046 1155 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb1P63158 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm16254-201ENSMUST00000131528 730 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm8358-201ENSMUST00000167222 555 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm23415-201ENSMUST00000175519 83 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm6900-201ENSMUST00000178971 342 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm4617-201ENSMUST00000178993 331 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm27999-201ENSMUST00000183539 193 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm4412-201ENSMUST00000186660 433 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm36974-201ENSMUST00000194200 1071 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm44779-201ENSMUST00000206937 708 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.25□□□□□ -1.57
Hmgb1P63158 AC153506.2-201ENSMUST00000218051 257 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 AC122924.2-201ENSMUST00000220799 298 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb1P63158 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm24525-201ENSMUST00000082917 151 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Gm43178-201ENSMUST00000197257 1386 ntBASIC5.25□□□□□ -1.57
Hmgb1P63158 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
Hmgb1P63158 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb1P63158 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.24□□□□□ -1.57
Hmgb1P63158 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Hmgb1P63158 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb1P63158 Gm37461-201ENSMUST00000193929 3704 ntBASIC5.24□□□□□ -1.57
Hmgb1P63158 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC5.24□□□□□ -1.57
Hmgb1P63158 Gm9440-201ENSMUST00000119667 539 ntBASIC5.24□□□□□ -1.57
Hmgb1P63158 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.24□□□□□ -1.57
Hmgb1P63158 Gm23887-201ENSMUST00000122683 172 ntBASIC5.24□□□□□ -1.57
Hmgb1P63158 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.24□□□□□ -1.57
Hmgb1P63158 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb1P63158 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb1P63158 Mir3058-201ENSMUST00000175126 91 ntBASIC5.24□□□□□ -1.57
Hmgb1P63158 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb1P63158 Gm27676-201ENSMUST00000183669 61 ntBASIC5.24□□□□□ -1.57
Hmgb1P63158 Gm28769-201ENSMUST00000190176 615 ntBASIC5.24□□□□□ -1.57
Hmgb1P63158 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb1P63158 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.24□□□□□ -1.57
Hmgb1P63158 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb1P63158 Gm44513-201ENSMUST00000206811 439 ntBASIC5.24□□□□□ -1.57
Hmgb1P63158 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.24□□□□□ -1.57
Hmgb1P63158 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
Hmgb1P63158 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb1P63158 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC5.24□□□□□ -1.57
Hmgb1P63158 AC167669.3-201ENSMUST00000224720 393 ntBASIC5.24□□□□□ -1.57
Hmgb1P63158 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.24□□□□□ -1.57
Hmgb1P63158 AC154252.1-201ENSMUST00000226041 473 ntBASIC5.24□□□□□ -1.57
Hmgb1P63158 AC125539.1-202ENSMUST00000226449 670 ntBASIC5.24□□□□□ -1.57
Hmgb1P63158 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.24□□□□□ -1.57
Hmgb1P63158 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Hmgb1P63158 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Hmgb1P63158 n-R5s220-201ENSMUST00000082926 120 ntBASIC5.24□□□□□ -1.57
Hmgb1P63158 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb1P63158 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Hmgb1P63158 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Hmgb1P63158 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb1P63158 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Hmgb1P63158 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Hmgb1P63158 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm44078-201ENSMUST00000204652 2646 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm13501-201ENSMUST00000118477 979 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm14915-201ENSMUST00000120747 204 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm22601-201ENSMUST00000157595 250 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb1P63158 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb1P63158 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm25874-201ENSMUST00000178030 79 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm8321-201ENSMUST00000181691 980 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm6137-201ENSMUST00000187552 578 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm43541-201ENSMUST00000197208 581 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm32300-201ENSMUST00000221735 515 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC5.23□□□□□ -1.57
Hmgb1P63158 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm23514-201ENSMUST00000082827 130 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Gm25582-201ENSMUST00000083412 110 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.23□□□□□ -1.57
Hmgb1P63158 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Hmgb1P63158 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms