Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC5.05□□□□□ -1.6
Ercc3P49135 Gm7540-201ENSMUST00000219764 926 ntBASIC5.05□□□□□ -1.6
Ercc3P49135 AC154552.4-201ENSMUST00000222171 151 ntBASIC5.05□□□□□ -1.6
Ercc3P49135 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.05□□□□□ -1.6
Ercc3P49135 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC5.05□□□□□ -1.6
Ercc3P49135 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC5.05□□□□□ -1.6
Ercc3P49135 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.05□□□□□ -1.6
Ercc3P49135 AC102352.1-201ENSMUST00000224187 582 ntBASIC5.05□□□□□ -1.6
Ercc3P49135 AC167977.2-201ENSMUST00000225676 682 ntBASIC5.05□□□□□ -1.6
Ercc3P49135 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC5.05□□□□□ -1.6
Ercc3P49135 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ercc3P49135 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ercc3P49135 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ercc3P49135 Mir383-201ENSMUST00000083523 70 ntBASIC5.05□□□□□ -1.6
Ercc3P49135 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ercc3P49135 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ercc3P49135 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ercc3P49135 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ercc3P49135 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
Ercc3P49135 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ercc3P49135 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.05□□□□□ -1.6
Ercc3P49135 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Ercc3P49135 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ercc3P49135 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ercc3P49135 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
Ercc3P49135 Gm6757-201ENSMUST00000189810 1706 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
Ercc3P49135 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ercc3P49135 Mir208b-201ENSMUST00000104735 77 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 Gm11432-201ENSMUST00000117334 231 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 Gm11878-201ENSMUST00000117908 400 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 Gm13087-201ENSMUST00000118298 256 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 Gm14916-201ENSMUST00000121904 204 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Ercc3P49135 Gm24289-201ENSMUST00000157629 135 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 Gm17109-201ENSMUST00000163985 358 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.04□□□□□ -1.6
Ercc3P49135 Gm44543-201ENSMUST00000209136 396 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ercc3P49135 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 AC158641.1-201ENSMUST00000218933 229 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 AC099578.1-201ENSMUST00000220147 435 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC5.04□□□□□ -1.6
Ercc3P49135 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.04□□□□□ -1.6
Ercc3P49135 AC160958.1-201ENSMUST00000224833 368 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 AC124569.1-201ENSMUST00000225932 101 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ercc3P49135 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ercc3P49135 Olfr203-201ENSMUST00000089305 924 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ercc3P49135 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ercc3P49135 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ercc3P49135 Gm37345-201ENSMUST00000193062 3138 ntBASIC5.04□□□□□ -1.6
Ercc3P49135 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ercc3P49135 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Ercc3P49135 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ercc3P49135 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ercc3P49135 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.03□□□□□ -1.6
Ercc3P49135 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ercc3P49135 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ercc3P49135 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ercc3P49135 Gm12994-201ENSMUST00000119601 447 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm12067-201ENSMUST00000119755 1148 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm13341-201ENSMUST00000120780 672 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm13865-201ENSMUST00000120957 865 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm23789-201ENSMUST00000122536 301 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm22985-201ENSMUST00000122754 116 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm25965-201ENSMUST00000157170 93 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm25979-201ENSMUST00000157177 138 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm26001-201ENSMUST00000157989 103 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm3123-201ENSMUST00000163480 480 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ercc3P49135 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ercc3P49135 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ercc3P49135 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm20648-201ENSMUST00000175815 328 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5.03□□□□□ -1.6
Ercc3P49135 Mir6401-201ENSMUST00000184499 109 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm4854-201ENSMUST00000185902 574 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm29428-201ENSMUST00000190086 409 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ercc3P49135 Gm28724-202ENSMUST00000194218 295 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ercc3P49135 Gm19418-201ENSMUST00000197436 580 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm7407-201ENSMUST00000208301 568 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 AC160134.1-201ENSMUST00000213450 551 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.03□□□□□ -1.6
Ercc3P49135 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ercc3P49135 AC154738.5-201ENSMUST00000227397 310 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ercc3P49135 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ercc3P49135 Gm23510-201ENSMUST00000083083 163 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Gm22864-201ENSMUST00000083950 130 ntBASIC5.03□□□□□ -1.6
Ercc3P49135 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Ercc3P49135 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5.03□□□□□ -1.6
Ercc3P49135 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms