Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rfx1P48377 Mir409-201ENSMUST00000198153 79 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm3148-201ENSMUST00000203594 612 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm43976-201ENSMUST00000203637 235 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm44687-201ENSMUST00000204975 235 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm7726-201ENSMUST00000206241 231 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm44654-201ENSMUST00000208052 329 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.14□□□□□ -1.43
Rfx1P48377 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC6.14□□□□□ -1.43
Rfx1P48377 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC6.14□□□□□ -1.43
Rfx1P48377 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.14□□□□□ -1.43
Rfx1P48377 AC174082.1-201ENSMUST00000221106 307 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 AL589742.1-201ENSMUST00000226034 349 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rfx1P48377 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm23515-201ENSMUST00000082829 107 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rfx1P48377 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rfx1P48377 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rfx1P48377 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rfx1P48377 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rfx1P48377 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Rfx1P48377 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Rfx1P48377 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC6.14□□□□□ -1.43
Rfx1P48377 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rfx1P48377 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Rfx1P48377 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Rfx1P48377 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rfx1P48377 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Rfx1P48377 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC6.13□□□□□ -1.43
Rfx1P48377 CT025710.1-201ENSMUST00000222949 2533 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Mir592-201ENSMUST00000102113 96 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Snord70-201ENSMUST00000104157 87 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Gm13681-201ENSMUST00000117925 210 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Gm13787-201ENSMUST00000120422 168 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Gm12007-201ENSMUST00000120978 597 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Gm13368-201ENSMUST00000122443 430 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Gm24395-201ENSMUST00000158139 125 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Gm25246-201ENSMUST00000175476 69 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC6.13□□□□□ -1.43
Rfx1P48377 Gm38097-201ENSMUST00000192936 439 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rfx1P48377 Ighv1-27-201ENSMUST00000194473 340 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Gm43237-201ENSMUST00000196835 1044 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Gm9560-201ENSMUST00000205012 1201 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Gm7675-201ENSMUST00000208828 686 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Gm45249-201ENSMUST00000211021 348 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC6.13□□□□□ -1.43
Rfx1P48377 Gm2436-201ENSMUST00000219562 774 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rfx1P48377 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC6.13□□□□□ -1.43
Rfx1P48377 CT025689.2-201ENSMUST00000224979 429 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Gm7984-201ENSMUST00000060640 538 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rfx1P48377 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Rfx1P48377 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Rfx1P48377 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rfx1P48377 Gm37781-201ENSMUST00000194773 3218 ntBASIC6.13□□□□□ -1.43
Rfx1P48377 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rfx1P48377 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Rfx1P48377 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Rfx1P48377 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Rfx1P48377 Gm22032-201ENSMUST00000116946 116 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Gm11322-201ENSMUST00000118095 435 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Gm15195-201ENSMUST00000118775 263 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Rfx1P48377 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 n-R5s98-201ENSMUST00000122549 119 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.12□□□□□ -1.43
Rfx1P48377 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Rfx1P48377 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Rfx1P48377 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Rfx1P48377 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Rfx1P48377 Gm25058-201ENSMUST00000157365 128 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Gm24225-201ENSMUST00000158825 98 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Rfx1P48377 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC6.12□□□□□ -1.43
Rfx1P48377 Gm27210-201ENSMUST00000184263 402 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC6.12□□□□□ -1.43
Rfx1P48377 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC6.12□□□□□ -1.43
Rfx1P48377 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.12□□□□□ -1.43
Rfx1P48377 Gm28552-201ENSMUST00000190725 388 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Gm7195-201ENSMUST00000190869 1707 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Gm37674-201ENSMUST00000194177 1834 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Gm36939-201ENSMUST00000194889 439 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Gm17781-201ENSMUST00000195232 649 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Gm43624-201ENSMUST00000197368 180 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Gm18100-201ENSMUST00000200897 452 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Gm44142-201ENSMUST00000203358 311 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Gm45105-201ENSMUST00000207824 397 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Rfx1P48377 AC116589.7-201ENSMUST00000221061 239 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 AC164117.1-201ENSMUST00000221726 239 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Gm5955-201ENSMUST00000222712 219 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 AC166574.7-201ENSMUST00000228502 704 ntBASIC6.12□□□□□ -1.43
Rfx1P48377 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms