Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cdx2P43241 Gm38332-201ENSMUST00000194189 147 ntBASIC3.41□□□□□ -1.86
Cdx2P43241 Gm42621-201ENSMUST00000198114 275 ntBASIC3.41□□□□□ -1.86
Cdx2P43241 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC3.41□□□□□ -1.86
Cdx2P43241 Gm45860-201ENSMUST00000212700 334 ntBASIC3.41□□□□□ -1.86
Cdx2P43241 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.41□□□□□ -1.86
Cdx2P43241 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.41□□□□□ -1.86
Cdx2P43241 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cdx2P43241 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cdx2P43241 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cdx2P43241 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cdx2P43241 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Cdx2P43241 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Cdx2P43241 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Cdx2P43241 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.4□□□□□ -1.86
Cdx2P43241 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.4□□□□□ -1.86
Cdx2P43241 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.4□□□□□ -1.86
Cdx2P43241 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.4□□□□□ -1.86
Cdx2P43241 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.4□□□□□ -1.86
Cdx2P43241 Gm24118-201ENSMUST00000103972 126 ntBASIC3.4□□□□□ -1.87
Cdx2P43241 Gm14622-201ENSMUST00000117117 468 ntBASIC3.4□□□□□ -1.87
Cdx2P43241 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Cdx2P43241 Gm26020-201ENSMUST00000122729 183 ntBASIC3.4□□□□□ -1.87
Cdx2P43241 Gm23775-201ENSMUST00000158991 249 ntBASIC3.4□□□□□ -1.87
Cdx2P43241 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.4□□□□□ -1.87
Cdx2P43241 Gm37293-201ENSMUST00000191658 295 ntBASIC3.4□□□□□ -1.87
Cdx2P43241 Gm36994-201ENSMUST00000192941 492 ntBASIC3.4□□□□□ -1.87
Cdx2P43241 Gm34005-201ENSMUST00000215834 282 ntBASIC3.4□□□□□ -1.87
Cdx2P43241 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Cdx2P43241 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.4□□□□□ -1.87
Cdx2P43241 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.4□□□□□ -1.87
Cdx2P43241 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.4□□□□□ -1.87
Cdx2P43241 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Cdx2P43241 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Cdx2P43241 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Cdx2P43241 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.4□□□□□ -1.87
Cdx2P43241 Gm4987-201ENSMUST00000078326 408 ntBASIC3.4□□□□□ -1.87
Cdx2P43241 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Cdx2P43241 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Cdx2P43241 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx2P43241 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx2P43241 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx2P43241 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx2P43241 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Cdx2P43241 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cdx2P43241 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
Cdx2P43241 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cdx2P43241 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Cdx2P43241 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx2P43241 Gm13664-201ENSMUST00000117304 345 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 Gm11708-201ENSMUST00000119530 832 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.39□□□□□ -1.87
Cdx2P43241 Gm24727-201ENSMUST00000158231 144 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 Gm23702-201ENSMUST00000158840 130 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
Cdx2P43241 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx2P43241 Gm14527-201ENSMUST00000179300 639 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 Gm21991-201ENSMUST00000180006 508 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.39□□□□□ -1.87
Cdx2P43241 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Cdx2P43241 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.39□□□□□ -1.87
Cdx2P43241 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.39□□□□□ -1.87
Cdx2P43241 Gm18597-201ENSMUST00000209519 694 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Cdx2P43241 Gm7948-201ENSMUST00000212607 844 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx2P43241 Gm8785-201ENSMUST00000220259 487 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx2P43241 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Cdx2P43241 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx2P43241 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 AC152981.1-201ENSMUST00000218320 2480 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx2P43241 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx2P43241 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cdx2P43241 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.39□□□□□ -1.87
Cdx2P43241 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
Cdx2P43241 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Cdx2P43241 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx2P43241 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx2P43241 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx2P43241 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm22936-201ENSMUST00000103955 126 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.38□□□□□ -1.87
Cdx2P43241 Gm12025-201ENSMUST00000117768 144 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdx2P43241 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.38□□□□□ -1.87
Cdx2P43241 Gm22034-201ENSMUST00000157283 134 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm23028-201ENSMUST00000158773 265 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.38□□□□□ -1.87
Cdx2P43241 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdx2P43241 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Cdx2P43241 Mir7k-201ENSMUST00000184115 110 ntBASIC3.38□□□□□ -1.87
Cdx2P43241 Gm28574-201ENSMUST00000185757 699 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms