Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Traf1P39428 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Traf1P39428 Gm28847-201ENSMUST00000186778 700 ntBASIC4.67□□□□□ -1.66
Traf1P39428 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.67□□□□□ -1.66
Traf1P39428 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Traf1P39428 Gm28924-201ENSMUST00000190012 241 ntBASIC4.67□□□□□ -1.66
Traf1P39428 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Traf1P39428 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC4.67□□□□□ -1.66
Traf1P39428 Gm29038-201ENSMUST00000191543 678 ntBASIC4.67□□□□□ -1.66
Traf1P39428 Gm37501-201ENSMUST00000192830 691 ntBASIC4.67□□□□□ -1.66
Traf1P39428 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.67□□□□□ -1.66
Traf1P39428 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.67□□□□□ -1.66
Traf1P39428 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.67□□□□□ -1.66
Traf1P39428 Gm7407-201ENSMUST00000208301 568 ntBASIC4.67□□□□□ -1.66
Traf1P39428 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.67□□□□□ -1.66
Traf1P39428 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.67□□□□□ -1.66
Traf1P39428 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.67□□□□□ -1.66
Traf1P39428 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Traf1P39428 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Traf1P39428 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Traf1P39428 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Traf1P39428 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Traf1P39428 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Traf1P39428 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Traf1P39428 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Traf1P39428 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Traf1P39428 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.67□□□□□ -1.66
Traf1P39428 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Traf1P39428 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Traf1P39428 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Traf1P39428 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Traf1P39428 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Traf1P39428 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Traf1P39428 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Traf1P39428 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Traf1P39428 Gm26387-201ENSMUST00000104238 132 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Gm4596-201ENSMUST00000117197 442 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Gm9078-201ENSMUST00000119126 617 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Gm14903-201ENSMUST00000122435 537 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.66□□□□□ -1.66
Traf1P39428 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Traf1P39428 Gm26320-201ENSMUST00000157742 306 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Gm23782-201ENSMUST00000157939 120 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Gm10357-201ENSMUST00000159886 264 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Gm16147-201ENSMUST00000162143 373 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Gm23816-201ENSMUST00000179617 132 ntBASIC4.66□□□□□ -1.66
Traf1P39428 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Traf1P39428 Gm7634-201ENSMUST00000185778 553 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Traf1P39428 Gm43649-201ENSMUST00000196596 391 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Gm43531-201ENSMUST00000200676 1114 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.66□□□□□ -1.66
Traf1P39428 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.66□□□□□ -1.66
Traf1P39428 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.66□□□□□ -1.66
Traf1P39428 Gm17917-201ENSMUST00000218561 953 ntBASIC4.66□□□□□ -1.66
Traf1P39428 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.66□□□□□ -1.66
Traf1P39428 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC4.66□□□□□ -1.66
Traf1P39428 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.66□□□□□ -1.66
Traf1P39428 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.66□□□□□ -1.66
Traf1P39428 AC125539.1-202ENSMUST00000226449 670 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Traf1P39428 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.66□□□□□ -1.66
Traf1P39428 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Traf1P39428 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Traf1P39428 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Traf1P39428 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Traf1P39428 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Traf1P39428 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.65□□□□□ -1.66
Traf1P39428 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Traf1P39428 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Traf1P39428 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.65□□□□□ -1.66
Traf1P39428 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
Traf1P39428 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Traf1P39428 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
Traf1P39428 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.65□□□□□ -1.66
Traf1P39428 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Traf1P39428 Gm14050-201ENSMUST00000117052 346 ntBASIC4.65□□□□□ -1.67
Traf1P39428 Gm14142-201ENSMUST00000117833 296 ntBASIC4.65□□□□□ -1.67
Traf1P39428 Gm5060-201ENSMUST00000120072 599 ntBASIC4.65□□□□□ -1.67
Traf1P39428 Gm14605-201ENSMUST00000120599 268 ntBASIC4.65□□□□□ -1.67
Traf1P39428 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.65□□□□□ -1.67
Traf1P39428 Gm12885-201ENSMUST00000122246 328 ntBASIC4.65□□□□□ -1.67
Traf1P39428 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.65□□□□□ -1.67
Traf1P39428 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Traf1P39428 Gm17155-201ENSMUST00000165969 473 ntBASIC4.65□□□□□ -1.67
Traf1P39428 Gm19503-201ENSMUST00000187109 241 ntBASIC4.65□□□□□ -1.67
Traf1P39428 Gm19774-201ENSMUST00000190667 114 ntBASIC4.65□□□□□ -1.67
Traf1P39428 Gm44092-201ENSMUST00000204470 258 ntBASIC4.65□□□□□ -1.67
Traf1P39428 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.65□□□□□ -1.67
Traf1P39428 Gm18242-201ENSMUST00000218455 542 ntBASIC4.65□□□□□ -1.67
Traf1P39428 Gm17829-201ENSMUST00000219782 344 ntBASIC4.65□□□□□ -1.67
Traf1P39428 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.65□□□□□ -1.67
Traf1P39428 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.65□□□□□ -1.67
Traf1P39428 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Traf1P39428 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Traf1P39428 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms