Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Mir6975-201ENSMUST00000184879 61 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm29484-201ENSMUST00000186067 324 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm29086-201ENSMUST00000186774 222 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm17929-201ENSMUST00000186851 627 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm29085-201ENSMUST00000187108 225 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm8874-201ENSMUST00000196826 286 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm4714-201ENSMUST00000203395 279 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC4.79□□□□□ -1.64
LdlrP35951 AC153924.1-201ENSMUST00000220117 312 ntBASIC4.79□□□□□ -1.64
LdlrP35951 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LdlrP35951 Olfr197-201ENSMUST00000080031 926 ntBASIC4.79□□□□□ -1.64
LdlrP35951 n-R5s79-201ENSMUST00000083071 120 ntBASIC4.79□□□□□ -1.64
LdlrP35951 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LdlrP35951 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LdlrP35951 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.79□□□□□ -1.64
LdlrP35951 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LdlrP35951 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LdlrP35951 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LdlrP35951 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LdlrP35951 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.79□□□□□ -1.64
LdlrP35951 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LdlrP35951 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.78□□□□□ -1.64
LdlrP35951 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.78□□□□□ -1.64
LdlrP35951 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.78□□□□□ -1.64
LdlrP35951 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LdlrP35951 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
LdlrP35951 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
LdlrP35951 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm19335-201ENSMUST00000195836 2069 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm23193-201ENSMUST00000102427 82 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LdlrP35951 Gm25419-201ENSMUST00000104215 191 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LdlrP35951 Gm9078-201ENSMUST00000119126 617 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm11352-201ENSMUST00000119264 517 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm12755-201ENSMUST00000122297 282 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm15899-201ENSMUST00000128586 238 ntBASIC4.78□□□□□ -1.64
LdlrP35951 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LdlrP35951 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
LdlrP35951 Gm26153-201ENSMUST00000157433 127 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.78□□□□□ -1.64
LdlrP35951 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LdlrP35951 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm5777-201ENSMUST00000177265 448 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm25942-201ENSMUST00000180080 110 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm9443-201ENSMUST00000188406 816 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LdlrP35951 Gm5983-201ENSMUST00000197739 770 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm7721-201ENSMUST00000200446 546 ntBASIC4.78□□□□□ -1.64
LdlrP35951 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LdlrP35951 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.78□□□□□ -1.64
LdlrP35951 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
LdlrP35951 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.78□□□□□ -1.64
LdlrP35951 AC167013.2-202ENSMUST00000227035 333 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LdlrP35951 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LdlrP35951 Gm22220-201ENSMUST00000082671 149 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm24166-201ENSMUST00000082724 135 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm23345-201ENSMUST00000083817 150 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm22350-201ENSMUST00000083924 156 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Gm23796-201ENSMUST00000084011 160 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LdlrP35951 Gm6177-201ENSMUST00000085589 465 ntBASIC4.78□□□□□ -1.64
LdlrP35951 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LdlrP35951 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LdlrP35951 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LdlrP35951 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LdlrP35951 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LdlrP35951 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LdlrP35951 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LdlrP35951 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LdlrP35951 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LdlrP35951 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LdlrP35951 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
LdlrP35951 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.77□□□□□ -1.65
LdlrP35951 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.77□□□□□ -1.65
LdlrP35951 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LdlrP35951 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.77□□□□□ -1.65
LdlrP35951 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LdlrP35951 AC162467.3-201ENSMUST00000219716 2172 ntBASIC4.77□□□□□ -1.65
LdlrP35951 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LdlrP35951 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LdlrP35951 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LdlrP35951 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LdlrP35951 Gm22519-201ENSMUST00000158270 178 ntBASIC4.77□□□□□ -1.65
LdlrP35951 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LdlrP35951 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC4.77□□□□□ -1.65
LdlrP35951 Gm25397-201ENSMUST00000176951 92 ntBASIC4.77□□□□□ -1.65
LdlrP35951 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LdlrP35951 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms