Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
P20040 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.43□□□□□ -1.86
P20040 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC3.43□□□□□ -1.86
P20040 Gm28439-201ENSMUST00000187714 876 ntBASIC3.43□□□□□ -1.86
P20040 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.43□□□□□ -1.86
P20040 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
P20040 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.43□□□□□ -1.86
P20040 Gm28655-201ENSMUST00000191538 692 ntBASIC3.43□□□□□ -1.86
P20040 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
P20040 Gm37098-201ENSMUST00000192290 244 ntBASIC3.43□□□□□ -1.86
P20040 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC3.43□□□□□ -1.86
P20040 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC3.43□□□□□ -1.86
P20040 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
P20040 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.43□□□□□ -1.86
P20040 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC3.43□□□□□ -1.86
P20040 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC3.43□□□□□ -1.86
P20040 Gm8035-201ENSMUST00000204625 687 ntBASIC3.43□□□□□ -1.86
P20040 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.43□□□□□ -1.86
P20040 Gm18672-201ENSMUST00000208035 270 ntBASIC3.43□□□□□ -1.86
P20040 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.43□□□□□ -1.86
P20040 Gm18043-201ENSMUST00000216741 739 ntBASIC3.43□□□□□ -1.86
P20040 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.43□□□□□ -1.86
P20040 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
P20040 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.43□□□□□ -1.86
P20040 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
P20040 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
P20040 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
P20040 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.43□□□□□ -1.86
P20040 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
P20040 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
P20040 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.43□□□□□ -1.86
P20040 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
P20040 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
P20040 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.42□□□□□ -1.86
P20040 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.42□□□□□ -1.86
P20040 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.42□□□□□ -1.86
P20040 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
P20040 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
P20040 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.42□□□□□ -1.86
P20040 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
P20040 Gm25097-201ENSMUST00000104042 145 ntBASIC3.42□□□□□ -1.86
P20040 Gm15151-201ENSMUST00000117106 177 ntBASIC3.42□□□□□ -1.86
P20040 Gm649-201ENSMUST00000117284 1054 ntBASIC3.42□□□□□ -1.86
P20040 Gm11406-201ENSMUST00000117418 484 ntBASIC3.42□□□□□ -1.86
P20040 Gm15313-201ENSMUST00000119179 282 ntBASIC3.42□□□□□ -1.86
P20040 Gm12587-201ENSMUST00000120180 427 ntBASIC3.42□□□□□ -1.86
P20040 Gm16100-201ENSMUST00000120489 231 ntBASIC3.42□□□□□ -1.86
P20040 Gm13743-201ENSMUST00000121486 724 ntBASIC3.42□□□□□ -1.86
P20040 Gm12885-201ENSMUST00000122246 328 ntBASIC3.42□□□□□ -1.86
P20040 Gm12226-201ENSMUST00000144172 876 ntBASIC3.42□□□□□ -1.86
P20040 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
P20040 Gm23587-201ENSMUST00000157658 84 ntBASIC3.42□□□□□ -1.86
P20040 Gm15974-201ENSMUST00000159103 531 ntBASIC3.42□□□□□ -1.86
P20040 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
P20040 Gm16563-201ENSMUST00000162673 423 ntBASIC3.42□□□□□ -1.86
P20040 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
P20040 Gm28011-201ENSMUST00000184097 175 ntBASIC3.42□□□□□ -1.86
P20040 Gm8600-201ENSMUST00000186320 905 ntBASIC3.42□□□□□ -1.86
P20040 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.42□□□□□ -1.86
P20040 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.42□□□□□ -1.86
P20040 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.42□□□□□ -1.86
P20040 Gm38279-201ENSMUST00000194067 1131 ntBASIC3.42□□□□□ -1.86
P20040 Gm38098-201ENSMUST00000194115 241 ntBASIC3.42□□□□□ -1.86
P20040 Gm9722-201ENSMUST00000194568 802 ntBASIC3.42□□□□□ -1.86
P20040 Gm19418-201ENSMUST00000197436 580 ntBASIC3.42□□□□□ -1.86
P20040 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
P20040 Gm43368-201ENSMUST00000200638 409 ntBASIC3.42□□□□□ -1.86
P20040 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
P20040 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.42□□□□□ -1.86
P20040 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC3.42□□□□□ -1.86
P20040 Gm9375-201ENSMUST00000208899 903 ntBASIC3.42□□□□□ -1.86
P20040 Gm2059-201ENSMUST00000212025 287 ntBASIC3.42□□□□□ -1.86
P20040 Gm18645-202ENSMUST00000212222 760 ntBASIC3.42□□□□□ -1.86
P20040 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
P20040 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.42□□□□□ -1.86
P20040 Gm18016-201ENSMUST00000216119 801 ntBASIC3.42□□□□□ -1.86
P20040 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.42□□□□□ -1.86
P20040 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.42□□□□□ -1.86
P20040 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
P20040 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
P20040 Gm10042-201ENSMUST00000079884 78 ntBASIC3.42□□□□□ -1.86
P20040 Snord21-201ENSMUST00000082519 94 ntBASIC3.42□□□□□ -1.86
P20040 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
P20040 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
P20040 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
P20040 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.42□□□□□ -1.86
P20040 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.42□□□□□ -1.86
P20040 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.41□□□□□ -1.86
P20040 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.41□□□□□ -1.86
P20040 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
P20040 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
P20040 Gm24318-201ENSMUST00000104490 131 ntBASIC3.41□□□□□ -1.86
P20040 Gm13831-201ENSMUST00000118764 302 ntBASIC3.41□□□□□ -1.86
P20040 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.41□□□□□ -1.86
P20040 Gm14591-201ENSMUST00000120407 518 ntBASIC3.41□□□□□ -1.86
P20040 Gm14605-201ENSMUST00000120599 268 ntBASIC3.41□□□□□ -1.86
P20040 Gm14903-201ENSMUST00000122435 537 ntBASIC3.41□□□□□ -1.86
P20040 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.41□□□□□ -1.86
P20040 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.41□□□□□ -1.86
P20040 Gm24773-201ENSMUST00000158513 99 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms