Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.75□□□□□ -1.49
RaraP11416 Gm2147-201ENSMUST00000193588 639 ntBASIC5.75□□□□□ -1.49
RaraP11416 Gm32447-201ENSMUST00000194265 697 ntBASIC5.75□□□□□ -1.49
RaraP11416 Gm37308-201ENSMUST00000194684 100 ntBASIC5.75□□□□□ -1.49
RaraP11416 Gm45249-201ENSMUST00000211021 348 ntBASIC5.75□□□□□ -1.49
RaraP11416 AC125531.1-201ENSMUST00000219849 221 ntBASIC5.75□□□□□ -1.49
RaraP11416 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.75□□□□□ -1.49
RaraP11416 AC158142.1-201ENSMUST00000226721 416 ntBASIC5.75□□□□□ -1.49
RaraP11416 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.75□□□□□ -1.49
RaraP11416 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RaraP11416 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RaraP11416 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RaraP11416 Gm16335-201ENSMUST00000077495 309 ntBASIC5.75□□□□□ -1.49
RaraP11416 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RaraP11416 Gm25929-201ENSMUST00000082784 107 ntBASIC5.75□□□□□ -1.49
RaraP11416 Gm23447-201ENSMUST00000082798 163 ntBASIC5.75□□□□□ -1.49
RaraP11416 Gm23511-201ENSMUST00000083084 164 ntBASIC5.75□□□□□ -1.49
RaraP11416 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.75□□□□□ -1.49
RaraP11416 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RaraP11416 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
RaraP11416 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.75□□□□□ -1.49
RaraP11416 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.75□□□□□ -1.49
RaraP11416 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RaraP11416 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RaraP11416 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RaraP11416 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RaraP11416 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RaraP11416 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RaraP11416 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RaraP11416 Gm25595-201ENSMUST00000102273 97 ntBASIC5.74□□□□□ -1.49
RaraP11416 Gm13681-201ENSMUST00000117925 210 ntBASIC5.74□□□□□ -1.49
RaraP11416 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC5.74□□□□□ -1.49
RaraP11416 Gm4852-201ENSMUST00000121202 729 ntBASIC5.74□□□□□ -1.49
RaraP11416 Gm23837-201ENSMUST00000122656 286 ntBASIC5.74□□□□□ -1.49
RaraP11416 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.74□□□□□ -1.49
RaraP11416 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC5.74□□□□□ -1.49
RaraP11416 Gm22804-201ENSMUST00000158052 101 ntBASIC5.74□□□□□ -1.49
RaraP11416 Gm26169-201ENSMUST00000158420 135 ntBASIC5.74□□□□□ -1.49
RaraP11416 Gm24175-201ENSMUST00000158931 129 ntBASIC5.74□□□□□ -1.49
RaraP11416 Gm8207-201ENSMUST00000171204 502 ntBASIC5.74□□□□□ -1.49
RaraP11416 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.74□□□□□ -1.49
RaraP11416 Gm8807-201ENSMUST00000179328 492 ntBASIC5.74□□□□□ -1.49
RaraP11416 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RaraP11416 Gm9775-201ENSMUST00000189402 331 ntBASIC5.74□□□□□ -1.49
RaraP11416 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.74□□□□□ -1.49
RaraP11416 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.74□□□□□ -1.49
RaraP11416 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RaraP11416 Gm31931-201ENSMUST00000219666 222 ntBASIC5.74□□□□□ -1.49
RaraP11416 AC122393.3-201ENSMUST00000226343 1059 ntBASIC5.74□□□□□ -1.49
RaraP11416 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.74□□□□□ -1.49
RaraP11416 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RaraP11416 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RaraP11416 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RaraP11416 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RaraP11416 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RaraP11416 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.74□□□□□ -1.49
RaraP11416 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RaraP11416 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RaraP11416 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.74□□□□□ -1.49
RaraP11416 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RaraP11416 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RaraP11416 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RaraP11416 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RaraP11416 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.73□□□□□ -1.49
RaraP11416 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RaraP11416 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.73□□□□□ -1.49
RaraP11416 Gm23593-201ENSMUST00000104309 120 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm13755-201ENSMUST00000118509 305 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm5384-201ENSMUST00000120313 463 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm14876-201ENSMUST00000120795 327 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm12872-201ENSMUST00000121835 320 ntBASIC5.73□□□□□ -1.49
RaraP11416 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RaraP11416 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
RaraP11416 Gm24186-201ENSMUST00000157983 127 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm23224-201ENSMUST00000158122 271 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm23354-201ENSMUST00000158426 104 ntBASIC5.73□□□□□ -1.49
RaraP11416 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm27887-201ENSMUST00000184367 102 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm28604-201ENSMUST00000186629 484 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm28566-201ENSMUST00000186714 484 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm28194-201ENSMUST00000187412 484 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm28886-202ENSMUST00000187889 484 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm18177-201ENSMUST00000188373 404 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm28554-202ENSMUST00000189175 484 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm29213-202ENSMUST00000189703 484 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm28851-202ENSMUST00000189757 484 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm28461-201ENSMUST00000190023 484 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.73□□□□□ -1.49
RaraP11416 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RaraP11416 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.73□□□□□ -1.49
RaraP11416 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.73□□□□□ -1.49
RaraP11416 Mir219c-201ENSMUST00000199860 60 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm44011-201ENSMUST00000203336 394 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RaraP11416 Gm18924-201ENSMUST00000211929 316 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm9068-201ENSMUST00000217393 455 ntBASIC5.73□□□□□ -1.49
RaraP11416 Gm4510-201ENSMUST00000218265 427 ntBASIC5.73□□□□□ -1.49
RaraP11416 AC138290.2-201ENSMUST00000218822 369 ntBASIC5.73□□□□□ -1.49
RaraP11416 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms