Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm12388-201ENSMUST00000119112 1887 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm42894-201ENSMUST00000200788 3390 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd3P09027 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd3P09027 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd3P09027 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm20300-201ENSMUST00000214634 3440 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hoxd3P09027 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hoxd3P09027 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd3P09027 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm15195-201ENSMUST00000118775 263 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm14877-201ENSMUST00000119803 478 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm22145-201ENSMUST00000157396 148 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm22849-201ENSMUST00000157713 307 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm22389-201ENSMUST00000158193 301 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm24343-201ENSMUST00000158708 111 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm16269-201ENSMUST00000160532 409 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd3P09027 Mir3473g-201ENSMUST00000183494 136 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm28769-201ENSMUST00000190176 615 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm36934-201ENSMUST00000192007 306 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm2926-201ENSMUST00000205625 239 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm44922-201ENSMUST00000206690 90 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd3P09027 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm8863-201ENSMUST00000216630 926 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm18628-201ENSMUST00000220584 475 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 AC211878.1-201ENSMUST00000221668 474 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd3P09027 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm24454-201ENSMUST00000083349 132 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Mir471-201ENSMUST00000093596 67 ntBASIC4.79□□□□□ -1.64
Hoxd3P09027 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd3P09027 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd3P09027 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd3P09027 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd3P09027 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd3P09027 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd3P09027 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd3P09027 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd3P09027 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm21122-201ENSMUST00000191548 3452 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm5832-201ENSMUST00000121704 1582 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd3P09027 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Hoxd3P09027 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Hoxd3P09027 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd3P09027 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm37775-201ENSMUST00000194120 2313 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd3P09027 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd3P09027 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd3P09027 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd3P09027 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
Hoxd3P09027 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Hoxd3P09027 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm43360-201ENSMUST00000197656 2887 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm15011-201ENSMUST00000117724 1480 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm23739-201ENSMUST00000102295 108 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm14868-201ENSMUST00000117840 216 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm11781-201ENSMUST00000118328 472 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm13493-201ENSMUST00000120318 493 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm6067-201ENSMUST00000121648 491 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm15237-201ENSMUST00000122104 469 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm6969-201ENSMUST00000140065 342 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm12226-201ENSMUST00000144172 876 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm25342-201ENSMUST00000157459 122 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm22655-201ENSMUST00000174949 96 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm22308-201ENSMUST00000177609 107 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm24862-201ENSMUST00000179103 79 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm23310-201ENSMUST00000179105 79 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm25461-201ENSMUST00000179293 79 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm29479-201ENSMUST00000190352 455 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm28288-201ENSMUST00000191019 214 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm37784-201ENSMUST00000193233 189 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm42665-201ENSMUST00000202100 586 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Hoxd3P09027 Gm20039-201ENSMUST00000210329 394 ntBASIC4.78□□□□□ -1.64
Hoxd3P09027 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms