Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm37416-201ENSMUST00000193596 318 ntBASIC2.85□□□□□ -1.95
Hmgb3O54879 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Hmgb3O54879 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC2.85□□□□□ -1.95
Hmgb3O54879 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC2.85□□□□□ -1.95
Hmgb3O54879 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm8423-201ENSMUST00000211387 607 ntBASIC2.85□□□□□ -1.95
Hmgb3O54879 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC2.85□□□□□ -1.95
Hmgb3O54879 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC2.85□□□□□ -1.95
Hmgb3O54879 AC117240.2-201ENSMUST00000220921 263 ntBASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm9818-201ENSMUST00000050900 255 ntBASIC2.85□□□□□ -1.95
Hmgb3O54879 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Hmgb3O54879 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
Hmgb3O54879 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Hmgb3O54879 AC153801.2-201ENSMUST00000219875 3372 ntBASIC2.85□□□□□ -1.95
Hmgb3O54879 AC159188.2-201ENSMUST00000224103 1301 ntBASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Hmgb3O54879 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm38031-201ENSMUST00000191819 3015 ntBASIC2.85□□□□□ -1.95
Hmgb3O54879 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Hmgb3O54879 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC2.84□□□□□ -1.95
Hmgb3O54879 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Hmgb3O54879 Gm9911-201ENSMUST00000211467 2802 ntBASIC2.84□□□□□ -1.95
Hmgb3O54879 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Hmgb3O54879 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Hmgb3O54879 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Hmgb3O54879 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC2.84□□□□□ -1.95
Hmgb3O54879 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Hmgb3O54879 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC2.84□□□□□ -1.95
Hmgb3O54879 Gm14695-201ENSMUST00000121721 282 ntBASIC2.84□□□□□ -1.95
Hmgb3O54879 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Hmgb3O54879 Gm24061-201ENSMUST00000157489 120 ntBASIC2.84□□□□□ -1.95
Hmgb3O54879 Gm23554-201ENSMUST00000157818 110 ntBASIC2.84□□□□□ -1.95
Hmgb3O54879 Gm24850-201ENSMUST00000158029 119 ntBASIC2.84□□□□□ -1.95
Hmgb3O54879 Gm25520-201ENSMUST00000158389 118 ntBASIC2.84□□□□□ -1.95
Hmgb3O54879 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Hmgb3O54879 Gm27648-201ENSMUST00000184315 107 ntBASIC2.84□□□□□ -1.95
Hmgb3O54879 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC2.84□□□□□ -1.95
Hmgb3O54879 Gm44852-201ENSMUST00000207950 369 ntBASIC2.84□□□□□ -1.95
Hmgb3O54879 Gm36247-201ENSMUST00000211834 285 ntBASIC2.84□□□□□ -1.95
Hmgb3O54879 Gm20946-201ENSMUST00000212367 461 ntBASIC2.84□□□□□ -1.95
Hmgb3O54879 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Hmgb3O54879 AC118006.2-201ENSMUST00000224167 962 ntBASIC2.84□□□□□ -1.95
Hmgb3O54879 AC144798.1-201ENSMUST00000228120 391 ntBASIC2.84□□□□□ -1.95
Hmgb3O54879 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Hmgb3O54879 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Hmgb3O54879 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Hmgb3O54879 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC2.84□□□□□ -1.95
Hmgb3O54879 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Hmgb3O54879 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Hmgb3O54879 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Hmgb3O54879 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC2.84□□□□□ -1.96
Hmgb3O54879 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.96
Hmgb3O54879 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Hmgb3O54879 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm18913-201ENSMUST00000204311 1789 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC2.83□□□□□ -1.96
Hmgb3O54879 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Hmgb3O54879 Scarna6-201ENSMUST00000158656 265 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm23633-201ENSMUST00000175293 119 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Mir6914-201ENSMUST00000184999 69 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm28141-201ENSMUST00000186676 342 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm9775-201ENSMUST00000189402 331 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm37431-201ENSMUST00000195102 111 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm44354-201ENSMUST00000196017 143 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm43044-201ENSMUST00000198091 379 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm43116-201ENSMUST00000199789 195 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm43090-201ENSMUST00000202459 314 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm8274-201ENSMUST00000219820 463 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC2.83□□□□□ -1.96
Hmgb3O54879 AC154241.1-201ENSMUST00000223952 356 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Hmgb3O54879 Gm23297-201ENSMUST00000083184 127 ntBASIC2.83□□□□□ -1.96
Hmgb3O54879 Mir133a-2-201ENSMUST00000083526 104 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms