Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Mir1198-201ENSMUST00000116995 121 ntBASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Gm12467-201ENSMUST00000117625 745 ntBASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Gm14810-201ENSMUST00000121628 486 ntBASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.55□□□□□ -1.84
Col4a6B1AVK5 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Gm21960-201ENSMUST00000181924 452 ntBASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Gm29259-201ENSMUST00000186396 694 ntBASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Gm43214-201ENSMUST00000199242 352 ntBASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Gm18672-201ENSMUST00000208035 270 ntBASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Gm20946-201ENSMUST00000212367 461 ntBASIC3.55□□□□□ -1.84
Col4a6B1AVK5 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.55□□□□□ -1.84
Col4a6B1AVK5 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Gm22249-201ENSMUST00000082485 136 ntBASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col4a6B1AVK5 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 AC153729.4-201ENSMUST00000217582 3826 ntBASIC3.54□□□□□ -1.84
Col4a6B1AVK5 AC154368.2-201ENSMUST00000222334 1724 ntBASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Gm14926-201ENSMUST00000120650 508 ntBASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Gm25967-201ENSMUST00000157168 147 ntBASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Gm27893-201ENSMUST00000184408 194 ntBASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Gm29365-201ENSMUST00000189461 699 ntBASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Gm43355-201ENSMUST00000196541 346 ntBASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Gm45400-201ENSMUST00000211603 653 ntBASIC3.54□□□□□ -1.84
Col4a6B1AVK5 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.54□□□□□ -1.84
Col4a6B1AVK5 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.54□□□□□ -1.84
Col4a6B1AVK5 AC166358.4-201ENSMUST00000223030 105 ntBASIC3.54□□□□□ -1.84
Col4a6B1AVK5 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.54□□□□□ -1.84
Col4a6B1AVK5 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col4a6B1AVK5 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Gm23766-201ENSMUST00000103894 80 ntBASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Gm11970-201ENSMUST00000116105 320 ntBASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Gm13761-201ENSMUST00000117238 807 ntBASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Gm14162-201ENSMUST00000121985 601 ntBASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Gm24780-201ENSMUST00000157635 143 ntBASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Gm25373-201ENSMUST00000158156 115 ntBASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Gm8600-201ENSMUST00000186320 905 ntBASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.53□□□□□ -1.84
Col4a6B1AVK5 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Gm25203-202ENSMUST00000200458 216 ntBASIC3.53□□□□□ -1.84
Col4a6B1AVK5 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Gm6562-201ENSMUST00000221903 464 ntBASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Gm25203-201ENSMUST00000082842 215 ntBASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Gm45066-201ENSMUST00000207528 2551 ntBASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Gm45178-201ENSMUST00000207744 4110 ntBASIC3.53□□□□□ -1.84
Col4a6B1AVK5 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Col4a6B1AVK5 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
Col4a6B1AVK5 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC3.52□□□□□ -1.85
Col4a6B1AVK5 Gm9208-201ENSMUST00000120468 948 ntBASIC3.52□□□□□ -1.85
Col4a6B1AVK5 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col4a6B1AVK5 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC3.52□□□□□ -1.85
Col4a6B1AVK5 Gm16101-201ENSMUST00000160695 430 ntBASIC3.52□□□□□ -1.85
Col4a6B1AVK5 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC3.52□□□□□ -1.85
Col4a6B1AVK5 Gm28118-201ENSMUST00000185957 294 ntBASIC3.52□□□□□ -1.85
Col4a6B1AVK5 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.52□□□□□ -1.85
Col4a6B1AVK5 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.52□□□□□ -1.85
Col4a6B1AVK5 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.52□□□□□ -1.85
Col4a6B1AVK5 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.52□□□□□ -1.85
Col4a6B1AVK5 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Col4a6B1AVK5 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col4a6B1AVK5 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms