Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm16318-201ENSMUST00000162402 601 ntBASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Gm28094-201ENSMUST00000185262 390 ntBASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Gm28785-201ENSMUST00000187478 379 ntBASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Gm28358-202ENSMUST00000189292 223 ntBASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.77□□□□□ -1.81
Scn3aA2ASI5 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.77□□□□□ -1.81
Scn3aA2ASI5 AC117202.1-201ENSMUST00000227007 445 ntBASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.77□□□□□ -1.81
Scn3aA2ASI5 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Scn3aA2ASI5 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm17159-201ENSMUST00000169043 482 ntBASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm27538-201ENSMUST00000185065 294 ntBASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm8106-201ENSMUST00000213123 523 ntBASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm18899-201ENSMUST00000217663 546 ntBASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm12858-201ENSMUST00000121913 208 ntBASIC3.76□□□□□ -1.81
Scn3aA2ASI5 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm22988-201ENSMUST00000122759 144 ntBASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm5527-201ENSMUST00000179821 642 ntBASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm29104-201ENSMUST00000186304 222 ntBASIC3.76□□□□□ -1.81
Scn3aA2ASI5 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm28920-201ENSMUST00000189957 699 ntBASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm37288-201ENSMUST00000193963 334 ntBASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Gm44964-201ENSMUST00000207011 273 ntBASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
Scn3aA2ASI5 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Gm11576-201ENSMUST00000117433 417 ntBASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Gm14389-201ENSMUST00000140453 241 ntBASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Gm7281-201ENSMUST00000160010 543 ntBASIC3.75□□□□□ -1.81
Scn3aA2ASI5 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Scn3aA2ASI5 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm13803-201ENSMUST00000117547 489 ntBASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm28724-202ENSMUST00000194218 295 ntBASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm18433-202ENSMUST00000195682 196 ntBASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm19726-201ENSMUST00000205008 240 ntBASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.74□□□□□ -1.81
Scn3aA2ASI5 BC023105-201ENSMUST00000073997 1227 ntBASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm12268-201ENSMUST00000118398 442 ntBASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm13155-201ENSMUST00000119277 646 ntBASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm8178-201ENSMUST00000121570 646 ntBASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm14162-201ENSMUST00000121985 601 ntBASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Gm18384-201ENSMUST00000195974 808 ntBASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Scn3aA2ASI5 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Scn3aA2ASI5 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms