Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm18363-201ENSMUST00000221671 730 ntBASIC3.51□□□□□ -1.85
Scn1aA2APX8 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.51□□□□□ -1.85
Scn1aA2APX8 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.51□□□□□ -1.85
Scn1aA2APX8 Mir365-2-201ENSMUST00000083555 112 ntBASIC3.51□□□□□ -1.85
Scn1aA2APX8 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Scn1aA2APX8 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Scn1aA2APX8 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Scn1aA2APX8 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Scn1aA2APX8 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Scn1aA2APX8 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Scn1aA2APX8 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Scn1aA2APX8 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC3.5□□□□□ -1.85
Scn1aA2APX8 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.5□□□□□ -1.85
Scn1aA2APX8 Gm16318-201ENSMUST00000162402 601 ntBASIC3.5□□□□□ -1.85
Scn1aA2APX8 Gm16563-201ENSMUST00000162673 423 ntBASIC3.5□□□□□ -1.85
Scn1aA2APX8 Trbv10-201ENSMUST00000168322 289 ntBASIC3.5□□□□□ -1.85
Scn1aA2APX8 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC3.5□□□□□ -1.85
Scn1aA2APX8 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Scn1aA2APX8 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.5□□□□□ -1.85
Scn1aA2APX8 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.5□□□□□ -1.85
Scn1aA2APX8 Gm5265-201ENSMUST00000076828 342 ntBASIC3.5□□□□□ -1.85
Scn1aA2APX8 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Scn1aA2APX8 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Scn1aA2APX8 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Scn1aA2APX8 Gm15190-201ENSMUST00000120855 276 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm17060-201ENSMUST00000172394 824 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 Mir6413-201ENSMUST00000184049 108 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm27538-201ENSMUST00000185065 294 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm29356-201ENSMUST00000186935 373 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 AC126554.4-201ENSMUST00000221055 409 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Scn1aA2APX8 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm35755-201ENSMUST00000222392 2077 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm6893-201ENSMUST00000118385 522 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm14101-201ENSMUST00000121502 473 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm14126-201ENSMUST00000122345 395 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm21638-201ENSMUST00000179473 836 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm18403-201ENSMUST00000192907 529 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm19181-201ENSMUST00000218891 940 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 Gm10237-201ENSMUST00000078393 273 ntBASIC3.49□□□□□ -1.85
Scn1aA2APX8 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Scn1aA2APX8 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Scn1aA2APX8 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.48□□□□□ -1.85
Scn1aA2APX8 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm24730-201ENSMUST00000158228 117 ntBASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Mir6914-201ENSMUST00000184999 69 ntBASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm2979-201ENSMUST00000193442 463 ntBASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm5552-201ENSMUST00000197149 515 ntBASIC3.48□□□□□ -1.85
Scn1aA2APX8 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.48□□□□□ -1.85
Scn1aA2APX8 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 AC158536.1-201ENSMUST00000222510 256 ntBASIC3.48□□□□□ -1.85
Scn1aA2APX8 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.48□□□□□ -1.85
Scn1aA2APX8 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm18719-201ENSMUST00000196696 1413 ntBASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.48□□□□□ -1.85
Scn1aA2APX8 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Snord65-201ENSMUST00000104269 72 ntBASIC3.48□□□□□ -1.85
Scn1aA2APX8 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm7299-201ENSMUST00000194441 581 ntBASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.48□□□□□ -1.85
Scn1aA2APX8 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.48□□□□□ -1.85
Scn1aA2APX8 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms