Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm9499-201ENSMUST00000180888 964 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm28847-201ENSMUST00000186778 700 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm29365-201ENSMUST00000189461 699 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm18036-201ENSMUST00000195256 272 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm43649-201ENSMUST00000196596 391 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm43919-201ENSMUST00000204303 364 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm8132-201ENSMUST00000204938 640 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm45380-201ENSMUST00000210465 315 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm6056-201ENSMUST00000221253 488 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm23464-201ENSMUST00000083145 147 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Olfr203-201ENSMUST00000089305 924 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.52□□□□□ -1.85
Trem1Q9JKE2 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm22778-201ENSMUST00000104090 128 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm11881-201ENSMUST00000119408 572 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm14008-201ENSMUST00000120483 274 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm15171-201ENSMUST00000122191 334 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm23250-201ENSMUST00000157444 267 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm23591-201ENSMUST00000157663 286 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm25555-201ENSMUST00000158078 111 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm23312-201ENSMUST00000158774 102 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm3191-201ENSMUST00000167139 346 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm25198-201ENSMUST00000178574 110 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm24520-201ENSMUST00000179510 110 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm26933-201ENSMUST00000182320 827 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Mir6903-201ENSMUST00000183597 88 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm27602-201ENSMUST00000183861 111 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm29596-201ENSMUST00000185710 385 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm38221-201ENSMUST00000195146 365 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm17781-201ENSMUST00000195232 649 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm18340-201ENSMUST00000196342 609 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm43237-201ENSMUST00000196835 1044 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm3189-201ENSMUST00000205595 832 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm18377-201ENSMUST00000215141 607 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm8264-201ENSMUST00000217801 465 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 AC153961.2-201ENSMUST00000218877 164 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm22220-201ENSMUST00000082671 149 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Mir337-201ENSMUST00000083592 97 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trem1Q9JKE2 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trem1Q9JKE2 Gm11923-201ENSMUST00000118135 508 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 121.7 ms