Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm22492-201ENSMUST00000157192 297 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm23121-201ENSMUST00000157653 173 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm22448-201ENSMUST00000179254 107 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm26180-201ENSMUST00000179942 107 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm28744-201ENSMUST00000189939 340 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm44494-201ENSMUST00000196760 129 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm18482-201ENSMUST00000202405 760 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm44336-201ENSMUST00000203696 468 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm7128-201ENSMUST00000211639 533 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm8158-201ENSMUST00000219220 465 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm8249-201ENSMUST00000219225 465 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm8112-201ENSMUST00000219637 465 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm10108-201ENSMUST00000078246 319 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm23447-201ENSMUST00000082798 163 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm16261-201ENSMUST00000096813 205 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim42Q9D2H5 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm13321-201ENSMUST00000117101 400 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm13176-201ENSMUST00000117910 477 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm12281-201ENSMUST00000119536 298 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm12110-201ENSMUST00000121601 579 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm15164-201ENSMUST00000122203 271 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Mir1953-201ENSMUST00000157866 89 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Ear-ps8-201ENSMUST00000161935 354 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm4152-201ENSMUST00000172675 259 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Snora15-201ENSMUST00000177461 131 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm6501-201ENSMUST00000187178 916 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm7041-201ENSMUST00000201227 524 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm44002-201ENSMUST00000205134 594 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm45616-201ENSMUST00000211711 319 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm18620-201ENSMUST00000222295 324 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm22508-201ENSMUST00000082772 110 ntBASIC5.61□□□□□ -1.51
Trim42Q9D2H5 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim42Q9D2H5 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Gm42484-201ENSMUST00000196075 2104 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Gm14771-201ENSMUST00000118249 203 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Gm12293-201ENSMUST00000121898 590 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Gm23213-201ENSMUST00000122715 313 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Gm6486-201ENSMUST00000166202 434 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim42Q9D2H5 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms