Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm28097-201ENSMUST00000187333 366 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm38076-201ENSMUST00000193889 450 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm43556-201ENSMUST00000196186 681 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm43198-201ENSMUST00000200927 326 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm18325-201ENSMUST00000203228 835 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm19131-201ENSMUST00000203408 789 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm8774-201ENSMUST00000203621 692 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 AC153852.1-201ENSMUST00000217881 567 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 AC157570.3-201ENSMUST00000219281 205 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm31849-201ENSMUST00000220306 375 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 AC156560.1-201ENSMUST00000221425 256 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm26121-201ENSMUST00000083364 162 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 AC135119.1-201ENSMUST00000227935 3717 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm6923-201ENSMUST00000118343 406 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm11869-201ENSMUST00000118701 329 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm14541-201ENSMUST00000118985 157 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm15480-201ENSMUST00000120442 519 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm11321-201ENSMUST00000121257 902 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm11438-201ENSMUST00000121582 189 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm14695-201ENSMUST00000121721 282 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm24836-201ENSMUST00000122609 108 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm3111-201ENSMUST00000167426 490 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm28471-201ENSMUST00000185994 615 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm28598-201ENSMUST00000186490 615 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm28666-201ENSMUST00000186649 274 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm29268-201ENSMUST00000188669 615 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm29218-205ENSMUST00000190846 615 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm28978-201ENSMUST00000191120 615 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm37172-201ENSMUST00000191926 615 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm44125-201ENSMUST00000203068 448 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm44990-201ENSMUST00000203922 217 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm3816-201ENSMUST00000209803 433 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm46194-201ENSMUST00000218136 320 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 AC138667.2-201ENSMUST00000224880 598 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 AC158521.1-201ENSMUST00000225295 660 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 AC166574.3-201ENSMUST00000226725 367 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 AC160930.1-201ENSMUST00000227194 337 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.05□□□□□ -1.6
Ddx56Q9D0R4 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm8145-201ENSMUST00000118220 745 ntBASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm11346-201ENSMUST00000118346 704 ntBASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm15745-201ENSMUST00000119807 115 ntBASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm13932-201ENSMUST00000120873 610 ntBASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm11260-201ENSMUST00000121163 942 ntBASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm12893-201ENSMUST00000121732 275 ntBASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm26153-201ENSMUST00000157433 127 ntBASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Gm25334-201ENSMUST00000158036 110 ntBASIC5.04□□□□□ -1.6
Ddx56Q9D0R4 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 109.9 ms