Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Gm24626-201ENSMUST00000082621 161 ntBASIC4.43□□□□□ -1.7
Ccdc47Q9D024 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.43□□□□□ -1.7
Ccdc47Q9D024 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ccdc47Q9D024 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc47Q9D024 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc47Q9D024 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.43□□□□□ -1.7
Ccdc47Q9D024 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc47Q9D024 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.43□□□□□ -1.7
Ccdc47Q9D024 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc47Q9D024 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc47Q9D024 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC4.43□□□□□ -1.7
Ccdc47Q9D024 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm24715-201ENSMUST00000102377 95 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm11923-201ENSMUST00000118135 508 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm13314-201ENSMUST00000118742 335 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm14103-201ENSMUST00000119075 366 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm12873-201ENSMUST00000119988 422 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm16331-201ENSMUST00000144274 498 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm26045-201ENSMUST00000157862 97 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm24930-201ENSMUST00000158315 83 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm26746-201ENSMUST00000181722 487 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Mir6899-201ENSMUST00000184798 64 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm18672-201ENSMUST00000208035 270 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm44869-201ENSMUST00000208836 357 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm45735-201ENSMUST00000212779 319 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm17820-201ENSMUST00000220213 1068 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 AC154838.1-201ENSMUST00000228944 911 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.42□□□□□ -1.7
Ccdc47Q9D024 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
Ccdc47Q9D024 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm25765-201ENSMUST00000104100 132 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm15001-201ENSMUST00000117657 795 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm23098-201ENSMUST00000157552 299 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm17075-201ENSMUST00000171924 670 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm23152-201ENSMUST00000175322 116 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm19898-201ENSMUST00000177490 251 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm37791-201ENSMUST00000195081 286 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm45189-201ENSMUST00000208567 363 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm6929-201ENSMUST00000210930 468 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm18016-201ENSMUST00000216119 801 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.41□□□□□ -1.7
Ccdc47Q9D024 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Gm4928-201ENSMUST00000219622 850 ntBASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ccdc47Q9D024 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
Ccdc47Q9D024 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Ccdc47Q9D024 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.4□□□□□ -1.7
Ccdc47Q9D024 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.4□□□□□ -1.7
Ccdc47Q9D024 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Ccdc47Q9D024 Gm22758-201ENSMUST00000102275 96 ntBASIC4.4□□□□□ -1.71
Ccdc47Q9D024 Gm15613-201ENSMUST00000118396 326 ntBASIC4.4□□□□□ -1.71
Ccdc47Q9D024 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC4.4□□□□□ -1.71
Ccdc47Q9D024 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.4□□□□□ -1.71
Ccdc47Q9D024 Gm23123-201ENSMUST00000157648 144 ntBASIC4.4□□□□□ -1.71
Ccdc47Q9D024 Gm24727-201ENSMUST00000158231 144 ntBASIC4.4□□□□□ -1.71
Ccdc47Q9D024 Gm24666-201ENSMUST00000158937 167 ntBASIC4.4□□□□□ -1.71
Ccdc47Q9D024 Gm10357-201ENSMUST00000159886 264 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms