Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm37300-201ENSMUST00000193327 280 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm19080-201ENSMUST00000196082 550 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm19726-201ENSMUST00000205008 240 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm17989-201ENSMUST00000211543 412 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm26019-201ENSMUST00000104407 119 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm15161-201ENSMUST00000117340 387 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm12982-201ENSMUST00000117408 190 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm8666-201ENSMUST00000117517 292 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm16327-201ENSMUST00000137146 228 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm22314-201ENSMUST00000158007 281 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm23112-201ENSMUST00000158606 125 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm10357-201ENSMUST00000159886 264 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm7094-201ENSMUST00000178379 366 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm27033-201ENSMUST00000183226 544 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm37684-201ENSMUST00000192779 355 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm44343-201ENSMUST00000196702 90 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm21006-201ENSMUST00000196930 667 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm35702-201ENSMUST00000198653 511 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm44371-201ENSMUST00000204148 467 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm45796-201ENSMUST00000212483 114 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.41□□□□□ -1.7
Smc1aQ9CU62 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 AC154838.1-201ENSMUST00000228944 911 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Mir34b-201ENSMUST00000083558 84 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Smc1aQ9CU62 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
Smc1aQ9CU62 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Smc1aQ9CU62 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Smc1aQ9CU62 Gm14299-201ENSMUST00000117586 397 ntBASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Gm14564-201ENSMUST00000122159 294 ntBASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Gm26915-201ENSMUST00000183080 748 ntBASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Gm27773-201ENSMUST00000184087 78 ntBASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Gm37629-201ENSMUST00000193635 1050 ntBASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Gm38088-201ENSMUST00000195829 241 ntBASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Gm19418-201ENSMUST00000197436 580 ntBASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Gm43814-201ENSMUST00000197851 413 ntBASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Gm43651-201ENSMUST00000199796 439 ntBASIC4.4□□□□□ -1.71
Smc1aQ9CU62 AC153975.1-201ENSMUST00000220087 926 ntBASIC4.4□□□□□ -1.71
Smc1aQ9CU62 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.4□□□□□ -1.71
Smc1aQ9CU62 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Smc1aQ9CU62 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm24581-201ENSMUST00000103962 133 ntBASIC4.39□□□□□ -1.71
Smc1aQ9CU62 Gm24403-201ENSMUST00000104616 130 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms