Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm21191-201ENSMUST00000186484 930 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm29503-201ENSMUST00000191044 930 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm42438-201ENSMUST00000197832 974 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm6064-201ENSMUST00000203999 454 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm45608-201ENSMUST00000210948 389 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm23443-201ENSMUST00000082916 128 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Olfr713-201ENSMUST00000098139 975 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm14589-201ENSMUST00000121640 727 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm25104-201ENSMUST00000122476 163 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm16250-201ENSMUST00000148974 256 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm20542-201ENSMUST00000174582 372 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm21241-201ENSMUST00000179551 934 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm20954-201ENSMUST00000189078 644 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm20819-201ENSMUST00000191091 925 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm20871-201ENSMUST00000191322 931 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm38061-201ENSMUST00000192490 365 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm8790-201ENSMUST00000194108 322 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm17967-201ENSMUST00000195319 647 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm42453-201ENSMUST00000200477 409 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm44232-201ENSMUST00000204537 225 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 AC153801.1-201ENSMUST00000217904 947 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm7540-201ENSMUST00000219764 926 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Use1Q9CQ56 Mir134-201ENSMUST00000083492 71 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 Gm10242-201ENSMUST00000090064 330 ntBASIC3.57□□□□□ -1.84
Use1Q9CQ56 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.56□□□□□ -1.84
Use1Q9CQ56 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Use1Q9CQ56 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Use1Q9CQ56 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Use1Q9CQ56 Gm12392-201ENSMUST00000118014 938 ntBASIC3.56□□□□□ -1.84
Use1Q9CQ56 Gm26476-201ENSMUST00000122618 313 ntBASIC3.56□□□□□ -1.84
Use1Q9CQ56 Gm6058-201ENSMUST00000154261 399 ntBASIC3.56□□□□□ -1.84
Use1Q9CQ56 Gm25713-201ENSMUST00000158625 109 ntBASIC3.56□□□□□ -1.84
Use1Q9CQ56 Gm24550-201ENSMUST00000158648 279 ntBASIC3.56□□□□□ -1.84
Use1Q9CQ56 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Use1Q9CQ56 Mir3090-201ENSMUST00000175597 87 ntBASIC3.56□□□□□ -1.84
Use1Q9CQ56 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.56□□□□□ -1.84
Use1Q9CQ56 Gm8600-201ENSMUST00000186320 905 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms