Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm24965-201ENSMUST00000157922 106 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm23179-201ENSMUST00000158693 304 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm25534-201ENSMUST00000175365 125 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm23186-201ENSMUST00000180078 107 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm37164-201ENSMUST00000192809 637 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm37050-201ENSMUST00000193464 466 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm42428-201ENSMUST00000198677 302 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm43675-201ENSMUST00000199468 1184 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm4714-201ENSMUST00000203395 279 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 CT010480.5-201ENSMUST00000225026 217 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 AC156790.3-201ENSMUST00000226200 254 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm5518-201ENSMUST00000084171 648 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm15603-201ENSMUST00000119252 492 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm12607-201ENSMUST00000120724 493 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm13677-201ENSMUST00000120739 595 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm12006-201ENSMUST00000120786 403 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm23121-201ENSMUST00000157653 173 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm26373-201ENSMUST00000157833 103 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm28655-201ENSMUST00000191538 692 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm5876-201ENSMUST00000203735 243 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 AC170810.3-201ENSMUST00000226177 374 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 AC166344.2-201ENSMUST00000226747 374 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Brf1Q8CFK2 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.28□□□□□ -1.56
Brf1Q8CFK2 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.28□□□□□ -1.56
Brf1Q8CFK2 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm11869-201ENSMUST00000118701 329 ntBASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm14901-201ENSMUST00000119001 283 ntBASIC5.28□□□□□ -1.56
Brf1Q8CFK2 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm23906-201ENSMUST00000157573 128 ntBASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm26914-201ENSMUST00000182262 223 ntBASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm7870-201ENSMUST00000184467 616 ntBASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Mir6986-201ENSMUST00000184483 58 ntBASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm27805-201ENSMUST00000184513 79 ntBASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm29413-201ENSMUST00000186019 880 ntBASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm29639-201ENSMUST00000188375 580 ntBASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm28414-201ENSMUST00000190111 294 ntBASIC5.28□□□□□ -1.56
Brf1Q8CFK2 Gm43070-201ENSMUST00000196938 415 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms