Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm22120-201ENSMUST00000175590 70 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Olfr1055-202ENSMUST00000188023 939 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Gm37989-201ENSMUST00000195202 803 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Gm43405-201ENSMUST00000198642 337 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Gm43925-201ENSMUST00000203498 206 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Gm17917-201ENSMUST00000218561 953 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC4.64□□□□□ -1.67
Nup88Q8CEC0 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.64□□□□□ -1.67
Nup88Q8CEC0 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Gm23455-201ENSMUST00000083331 100 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.64□□□□□ -1.67
Nup88Q8CEC0 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Nup88Q8CEC0 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm14299-201ENSMUST00000117586 397 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm16100-201ENSMUST00000120489 231 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm24840-201ENSMUST00000122603 147 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm23231-201ENSMUST00000157299 104 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm24875-201ENSMUST00000158888 104 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm17155-201ENSMUST00000165969 473 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm17060-201ENSMUST00000172394 824 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm8641-201ENSMUST00000186995 826 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm38061-201ENSMUST00000192490 365 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm42451-201ENSMUST00000197410 244 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm5309-201ENSMUST00000197416 677 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm44583-201ENSMUST00000207478 281 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm30738-201ENSMUST00000221346 502 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 AC131743.3-201ENSMUST00000222099 662 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm7099-201ENSMUST00000080066 554 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Mir132-201ENSMUST00000083603 66 ntBASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
Nup88Q8CEC0 Gm7754-201ENSMUST00000223075 2064 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Gm23271-201ENSMUST00000104052 124 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Gm24318-201ENSMUST00000104490 131 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Gm14050-201ENSMUST00000117052 346 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Defa-ps1-201ENSMUST00000119062 282 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Defa-ps6-201ENSMUST00000122172 282 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Gm23753-201ENSMUST00000157575 149 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Gm23365-201ENSMUST00000175019 125 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Gm25960-201ENSMUST00000175110 125 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Gm44453-201ENSMUST00000175161 126 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Gm25195-201ENSMUST00000177656 126 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Nup88Q8CEC0 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Gm29013-201ENSMUST00000187431 237 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Gm37416-201ENSMUST00000193596 318 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Gm45735-201ENSMUST00000212779 319 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.62□□□□□ -1.67
Nup88Q8CEC0 AC153932.1-201ENSMUST00000218558 787 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Nup88Q8CEC0 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.62□□□□□ -1.67
Nup88Q8CEC0 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms