Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm3454-201ENSMUST00000185571 412 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm18448-201ENSMUST00000186286 599 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm2314-201ENSMUST00000200391 586 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm44779-201ENSMUST00000206937 708 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm2059-201ENSMUST00000212025 287 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 CT030030.1-201ENSMUST00000218809 152 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 AC141642.1-201ENSMUST00000220598 229 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 AC154241.1-201ENSMUST00000223952 356 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 AC159231.1-201ENSMUST00000225365 226 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 AC174459.2-201ENSMUST00000226036 160 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm23097-201ENSMUST00000083448 105 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm14852-201ENSMUST00000120065 647 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm15142-201ENSMUST00000121013 856 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm13471-201ENSMUST00000122057 433 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm26362-201ENSMUST00000158865 315 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm44370-201ENSMUST00000175436 112 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm6214-201ENSMUST00000178845 541 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm29534-201ENSMUST00000187328 382 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm37095-201ENSMUST00000195421 205 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm43675-201ENSMUST00000199468 1184 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm44485-201ENSMUST00000199569 137 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm45171-201ENSMUST00000206360 736 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm44650-201ENSMUST00000206929 194 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm7624-201ENSMUST00000209702 435 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 CR974429.1-201ENSMUST00000220877 827 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm7093-201ENSMUST00000223004 581 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 CT030135.1-201ENSMUST00000223760 570 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 n-R5s162-201ENSMUST00000082581 119 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm22364-201ENSMUST00000083097 98 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm23846-201ENSMUST00000083835 107 ntBASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usp40Q8BWR4 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm37569-201ENSMUST00000192111 1722 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Mir92b-201ENSMUST00000102300 83 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm23273-201ENSMUST00000104058 135 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm15126-201ENSMUST00000118631 833 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm11943-201ENSMUST00000119473 327 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm13627-201ENSMUST00000119700 706 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm13368-201ENSMUST00000122443 430 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm6058-201ENSMUST00000154261 399 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm20648-201ENSMUST00000175815 328 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm24418-201ENSMUST00000177597 79 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm24639-201ENSMUST00000178518 79 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm23076-201ENSMUST00000179082 79 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm25077-201ENSMUST00000179157 79 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm27976-201ENSMUST00000183635 162 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm43510-201ENSMUST00000197922 353 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm44927-201ENSMUST00000207573 716 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm46193-201ENSMUST00000219399 364 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm4057-201ENSMUST00000221407 368 ntBASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC6.19□□□□□ -1.42
Usp40Q8BWR4 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms