Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm15108-201ENSMUST00000116160 803 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm23178-201ENSMUST00000116782 95 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm13501-201ENSMUST00000118477 979 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm12190-201ENSMUST00000120001 187 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm15480-201ENSMUST00000120442 519 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm15111-201ENSMUST00000122142 878 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm22107-201ENSMUST00000122548 100 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Mir1947-201ENSMUST00000158235 85 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm5929-201ENSMUST00000166883 487 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm8902-201ENSMUST00000174341 1096 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm29563-201ENSMUST00000187249 496 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm18117-201ENSMUST00000187720 742 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm8823-201ENSMUST00000193158 433 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm19131-201ENSMUST00000203408 789 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm31931-201ENSMUST00000219666 222 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm8785-201ENSMUST00000220259 487 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 AC154828.2-201ENSMUST00000220908 1070 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Snora31-201ENSMUST00000083213 130 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm23256-201ENSMUST00000102235 110 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm26140-201ENSMUST00000103807 110 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm24469-201ENSMUST00000104487 131 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm15916-201ENSMUST00000118355 736 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm26320-201ENSMUST00000157742 306 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm24811-201ENSMUST00000175313 100 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm22908-201ENSMUST00000177620 110 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm27233-201ENSMUST00000184030 307 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Mir6391-201ENSMUST00000184391 104 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm28654-201ENSMUST00000189801 379 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm38270-201ENSMUST00000192721 407 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm38356-201ENSMUST00000194313 408 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm4644-201ENSMUST00000197587 400 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm43814-201ENSMUST00000197851 413 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm5338-201ENSMUST00000209530 639 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Mir325-201ENSMUST00000083491 98 ntBASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ccdc40Q8BI79 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.15□□□□□ -1.74
Ccdc40Q8BI79 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.15□□□□□ -1.74
Ccdc40Q8BI79 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.15□□□□□ -1.74
Ccdc40Q8BI79 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Ccdc40Q8BI79 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm22272-201ENSMUST00000104039 134 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm12568-201ENSMUST00000117362 624 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm14840-201ENSMUST00000122135 594 ntBASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.15□□□□□ -1.75
Ccdc40Q8BI79 Gm25913-201ENSMUST00000157617 135 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms