Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm25806-201ENSMUST00000122782 122 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm24745-201ENSMUST00000157840 85 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm24850-201ENSMUST00000158029 119 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm43304-201ENSMUST00000196803 326 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm42451-201ENSMUST00000197410 244 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm43675-201ENSMUST00000199468 1184 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm3189-201ENSMUST00000205595 832 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Fth-ps3-201ENSMUST00000210405 358 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC5.15□□□□□ -1.59
Ddx58Q6Q899 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm22155-201ENSMUST00000083836 162 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Mir465-201ENSMUST00000093563 74 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm45804-201ENSMUST00000212137 3435 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm26377-201ENSMUST00000102184 108 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm22488-201ENSMUST00000116811 127 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm13379-201ENSMUST00000118053 621 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm15387-201ENSMUST00000120421 648 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm12486-201ENSMUST00000120887 541 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm25102-201ENSMUST00000122479 112 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx58Q6Q899 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm8296-201ENSMUST00000185597 524 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm37164-201ENSMUST00000192809 637 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Mir129b-201ENSMUST00000197461 65 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm43004-201ENSMUST00000201872 703 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm18327-201ENSMUST00000202426 830 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm9375-201ENSMUST00000208899 903 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.14□□□□□ -1.59
Ddx58Q6Q899 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm22864-201ENSMUST00000083950 130 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm5518-201ENSMUST00000084171 648 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ddx58Q6Q899 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm19335-201ENSMUST00000195836 2069 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm25414-201ENSMUST00000101814 107 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm15110-201ENSMUST00000117545 881 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm14591-201ENSMUST00000120407 518 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm25979-201ENSMUST00000157177 138 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm24961-201ENSMUST00000157918 184 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm29610-201ENSMUST00000187749 453 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm38061-201ENSMUST00000192490 365 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm4644-201ENSMUST00000197587 400 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm42896-201ENSMUST00000201249 1113 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 AC124569.1-201ENSMUST00000225932 101 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm42717-201ENSMUST00000197309 3463 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ddx58Q6Q899 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ddx58Q6Q899 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms