Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC4.64□□□□□ -1.67
CtcfQ61164 Gm38234-201ENSMUST00000195204 421 ntBASIC4.64□□□□□ -1.67
CtcfQ61164 Gm42830-201ENSMUST00000196642 313 ntBASIC4.64□□□□□ -1.67
CtcfQ61164 Gm43856-201ENSMUST00000197004 369 ntBASIC4.64□□□□□ -1.67
CtcfQ61164 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.64□□□□□ -1.67
CtcfQ61164 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC4.64□□□□□ -1.67
CtcfQ61164 Gm19709-201ENSMUST00000215403 482 ntBASIC4.64□□□□□ -1.67
CtcfQ61164 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.64□□□□□ -1.67
CtcfQ61164 Gm9973-202ENSMUST00000220926 166 ntBASIC4.64□□□□□ -1.67
CtcfQ61164 AC166830.1-201ENSMUST00000224201 533 ntBASIC4.64□□□□□ -1.67
CtcfQ61164 AC160962.2-201ENSMUST00000224761 632 ntBASIC4.64□□□□□ -1.67
CtcfQ61164 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CtcfQ61164 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CtcfQ61164 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
CtcfQ61164 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CtcfQ61164 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CtcfQ61164 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CtcfQ61164 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CtcfQ61164 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CtcfQ61164 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CtcfQ61164 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CtcfQ61164 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.64□□□□□ -1.67
CtcfQ61164 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.64□□□□□ -1.67
CtcfQ61164 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CtcfQ61164 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
CtcfQ61164 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CtcfQ61164 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CtcfQ61164 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CtcfQ61164 Gm15126-201ENSMUST00000118631 833 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Gm15603-201ENSMUST00000119252 492 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC4.63□□□□□ -1.67
CtcfQ61164 Gm16100-201ENSMUST00000120489 231 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC4.63□□□□□ -1.67
CtcfQ61164 Gm13000-201ENSMUST00000120937 496 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC4.63□□□□□ -1.67
CtcfQ61164 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CtcfQ61164 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CtcfQ61164 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.63□□□□□ -1.67
CtcfQ61164 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CtcfQ61164 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CtcfQ61164 Gm29073-201ENSMUST00000185563 664 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CtcfQ61164 Gm28788-201ENSMUST00000189717 375 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Gm29558-201ENSMUST00000190134 375 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Gm29165-201ENSMUST00000190655 664 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Gm29211-201ENSMUST00000191470 664 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC4.63□□□□□ -1.67
CtcfQ61164 Gm42566-201ENSMUST00000197120 643 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Gm6051-201ENSMUST00000201529 352 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Gm44059-201ENSMUST00000204048 351 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.63□□□□□ -1.67
CtcfQ61164 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 AC124542.1-201ENSMUST00000205588 908 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.63□□□□□ -1.67
CtcfQ61164 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC4.63□□□□□ -1.67
CtcfQ61164 AC153957.1-201ENSMUST00000215235 229 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CtcfQ61164 Gm19134-201ENSMUST00000221203 487 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 AC137902.2-201ENSMUST00000227989 576 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CtcfQ61164 Gm23464-201ENSMUST00000083145 147 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CtcfQ61164 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.63□□□□□ -1.67
CtcfQ61164 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CtcfQ61164 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
CtcfQ61164 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
CtcfQ61164 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CtcfQ61164 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CtcfQ61164 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CtcfQ61164 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CtcfQ61164 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CtcfQ61164 AC153881.3-201ENSMUST00000218494 1561 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
CtcfQ61164 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CtcfQ61164 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CtcfQ61164 Gm14879-201ENSMUST00000117308 507 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Gm11698-201ENSMUST00000117948 455 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Gm13092-201ENSMUST00000136346 260 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.62□□□□□ -1.67
CtcfQ61164 Gm23781-201ENSMUST00000157940 308 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Gm20526-201ENSMUST00000173416 158 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.62□□□□□ -1.67
CtcfQ61164 Gm27690-201ENSMUST00000184596 126 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Mir6933-201ENSMUST00000184982 81 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Gm4854-201ENSMUST00000185902 574 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Gm28648-201ENSMUST00000190092 343 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Gm28500-201ENSMUST00000190286 151 ntBASIC4.62□□□□□ -1.67
CtcfQ61164 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC4.62□□□□□ -1.67
CtcfQ61164 Gm28724-202ENSMUST00000194218 295 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms