Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.04□□□□□ -1.76
Ccdc88aQ5SNZ0 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc88aQ5SNZ0 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc88aQ5SNZ0 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm9157-201ENSMUST00000117673 225 ntBASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 n-R5s30-201ENSMUST00000122624 122 ntBASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm26100-201ENSMUST00000157245 127 ntBASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm23671-201ENSMUST00000157472 103 ntBASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm18522-201ENSMUST00000173947 650 ntBASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm43214-201ENSMUST00000199242 352 ntBASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm16419-201ENSMUST00000221057 625 ntBASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 AC164597.2-201ENSMUST00000226738 603 ntBASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm7117-201ENSMUST00000071515 387 ntBASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc88aQ5SNZ0 Gm13692-201ENSMUST00000120774 371 ntBASIC4.03□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm25967-201ENSMUST00000157168 147 ntBASIC4.03□□□□□ -1.77
Ccdc88aQ5SNZ0 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC4.03□□□□□ -1.77
Ccdc88aQ5SNZ0 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.03□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC4.03□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm44887-201ENSMUST00000208980 178 ntBASIC4.03□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Ccdc88aQ5SNZ0 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC4.03□□□□□ -1.77
Ccdc88aQ5SNZ0 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC4.03□□□□□ -1.77
Ccdc88aQ5SNZ0 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm12467-201ENSMUST00000117625 745 ntBASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm12722-201ENSMUST00000118507 493 ntBASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm13121-201ENSMUST00000120637 632 ntBASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm26991-201ENSMUST00000180950 620 ntBASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm18505-201ENSMUST00000187360 790 ntBASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 AC134439.2-201ENSMUST00000221950 467 ntBASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.02□□□□□ -1.77
Ccdc88aQ5SNZ0 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm14811-201ENSMUST00000117070 117 ntBASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm8600-201ENSMUST00000186320 905 ntBASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm38166-201ENSMUST00000191660 471 ntBASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm14681-201ENSMUST00000118047 411 ntBASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm26254-201ENSMUST00000122491 118 ntBASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm25707-201ENSMUST00000175120 96 ntBASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm22910-201ENSMUST00000178568 132 ntBASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm28920-201ENSMUST00000189957 699 ntBASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm38330-201ENSMUST00000192743 959 ntBASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm22043-201ENSMUST00000082993 158 ntBASIC4.01□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm8475-201ENSMUST00000118211 526 ntBASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm15142-201ENSMUST00000121013 856 ntBASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm24019-201ENSMUST00000178620 107 ntBASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm26243-201ENSMUST00000179260 107 ntBASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ccdc88aQ5SNZ0 Gm28614-201ENSMUST00000186483 458 ntBASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms