Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm22908-201ENSMUST00000177620 110 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm28574-201ENSMUST00000185757 699 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm28781-201ENSMUST00000185760 696 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm28339-201ENSMUST00000185845 696 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm29062-201ENSMUST00000186032 694 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm29574-201ENSMUST00000186226 696 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm28828-201ENSMUST00000186601 696 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm28057-201ENSMUST00000186603 615 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm28255-201ENSMUST00000187101 694 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm29307-201ENSMUST00000187367 696 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm28397-201ENSMUST00000187970 699 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm28896-201ENSMUST00000188609 696 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm29545-201ENSMUST00000188878 694 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm29339-201ENSMUST00000189613 696 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm28159-201ENSMUST00000190296 696 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm29366-201ENSMUST00000190481 699 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm29407-201ENSMUST00000191468 696 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm37433-201ENSMUST00000192695 678 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm37441-201ENSMUST00000194430 678 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm38107-201ENSMUST00000194873 696 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm37575-201ENSMUST00000195467 309 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm44349-201ENSMUST00000197048 123 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm5309-201ENSMUST00000197416 677 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm36382-201ENSMUST00000198892 541 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm45608-201ENSMUST00000210948 389 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 CT030194.2-201ENSMUST00000225752 379 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm14570-201ENSMUST00000119444 391 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm7363-201ENSMUST00000119883 399 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm11233-201ENSMUST00000122357 634 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm26460-201ENSMUST00000175061 126 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm22646-201ENSMUST00000175130 115 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Mir5098-201ENSMUST00000175320 82 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm7094-201ENSMUST00000178379 366 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm14527-201ENSMUST00000179300 639 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Mir7028-201ENSMUST00000185016 64 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm27392-201ENSMUST00000185041 101 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm37934-201ENSMUST00000192902 402 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm44343-201ENSMUST00000196702 90 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm44583-201ENSMUST00000207478 281 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.04□□□□□ -1.92
Trav5d-4Q5R1F6 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm13009-201ENSMUST00000121307 267 ntBASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.03□□□□□ -1.92
Trav5d-4Q5R1F6 Gm4725-201ENSMUST00000151048 587 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms