Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm10444-201ENSMUST00000126708 148 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm26045-201ENSMUST00000157862 97 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm22314-201ENSMUST00000158007 281 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm25557-201ENSMUST00000158084 315 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm24875-201ENSMUST00000158888 104 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm2966-201ENSMUST00000166052 481 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm17204-201ENSMUST00000167936 478 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm24969-201ENSMUST00000180331 79 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm27899-201ENSMUST00000184715 64 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm29105-201ENSMUST00000187256 450 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm7299-201ENSMUST00000194441 581 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm9238-201ENSMUST00000196181 329 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm4734-201ENSMUST00000200117 777 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm42681-201ENSMUST00000197999 1611 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm24715-201ENSMUST00000102377 95 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm15333-201ENSMUST00000118825 364 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm13155-201ENSMUST00000119277 646 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm11625-201ENSMUST00000119535 296 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm8178-201ENSMUST00000121570 646 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm14695-201ENSMUST00000121721 282 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm2892-201ENSMUST00000145537 711 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm22108-201ENSMUST00000177961 106 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm25944-201ENSMUST00000178758 94 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm2092-201ENSMUST00000178887 639 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm24798-201ENSMUST00000179334 106 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm2759-201ENSMUST00000179938 639 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm38046-201ENSMUST00000192733 550 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm7897-201ENSMUST00000193981 554 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm43424-201ENSMUST00000200484 253 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm43979-201ENSMUST00000203179 475 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm44887-201ENSMUST00000208980 178 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 AC162934.3-201ENSMUST00000223015 841 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 AC156803.1-201ENSMUST00000224407 820 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim40Q3UWA4 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.74□□□□□ -1.81
Trim40Q3UWA4 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm14365-201ENSMUST00000117535 587 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm16128-201ENSMUST00000117855 626 ntBASIC3.73□□□□□ -1.81
Trim40Q3UWA4 Gm15951-201ENSMUST00000118377 400 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms