Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm24281-201ENSMUST00000104234 136 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm15926-201ENSMUST00000120492 550 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm15885-201ENSMUST00000122114 388 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm22120-201ENSMUST00000175590 70 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm25598-201ENSMUST00000179031 107 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm38061-201ENSMUST00000192490 365 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm43405-201ENSMUST00000198642 337 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm42516-201ENSMUST00000198691 767 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm44583-201ENSMUST00000207478 281 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm45539-201ENSMUST00000210313 428 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm45796-201ENSMUST00000212483 114 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm24626-201ENSMUST00000082621 161 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm23677-201ENSMUST00000083156 104 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.77□□□□□ -1.81
Trafd1Q3UDK1 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Mir690-201ENSMUST00000102110 109 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm12448-201ENSMUST00000118852 655 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm14623-201ENSMUST00000121398 603 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm13508-201ENSMUST00000121639 775 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm24550-201ENSMUST00000158648 279 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm16026-202ENSMUST00000159695 772 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm16563-201ENSMUST00000162673 423 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm27864-201ENSMUST00000183704 190 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm27773-201ENSMUST00000184087 78 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm9541-201ENSMUST00000188409 502 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm37416-201ENSMUST00000193596 318 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm42926-201ENSMUST00000200496 697 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm22868-201ENSMUST00000083955 164 ntBASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trafd1Q3UDK1 Gm38104-201ENSMUST00000195121 1895 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm24581-201ENSMUST00000103962 133 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm11406-201ENSMUST00000117418 484 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm14282-201ENSMUST00000119484 240 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm11830-201ENSMUST00000120175 561 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm13080-201ENSMUST00000120556 420 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm25109-201ENSMUST00000122474 114 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm24592-201ENSMUST00000122505 106 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm6969-201ENSMUST00000140065 342 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm24505-201ENSMUST00000157682 126 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm22339-201ENSMUST00000157718 62 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Gm21232-201ENSMUST00000182187 1006 ntBASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.75□□□□□ -1.81
Trafd1Q3UDK1 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms