Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm14082-201ENSMUST00000118582 801 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm12607-201ENSMUST00000120724 493 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm25909-201ENSMUST00000157619 121 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm24853-201ENSMUST00000158026 121 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm25714-201ENSMUST00000158626 296 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm9457-201ENSMUST00000180176 372 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm28116-201ENSMUST00000189064 387 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm36998-201ENSMUST00000193205 704 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm42999-201ENSMUST00000198049 786 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm42579-201ENSMUST00000200512 734 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm44261-201ENSMUST00000203337 209 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Olfr936-202ENSMUST00000216912 937 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 AC104832.1-201ENSMUST00000222938 550 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm24043-201ENSMUST00000083108 116 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Mir342-201ENSMUST00000083502 99 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Mir338-201ENSMUST00000083666 98 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Usp39Q3TIX9 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm25537-201ENSMUST00000103851 109 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm15076-201ENSMUST00000117076 474 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm8202-201ENSMUST00000117682 310 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm23902-201ENSMUST00000157571 134 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm2343-201ENSMUST00000161177 1042 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm20773-201ENSMUST00000178940 681 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Mir496b-201ENSMUST00000184935 113 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm28579-201ENSMUST00000186143 369 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm28847-201ENSMUST00000186778 700 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm20203-201ENSMUST00000192352 332 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm37243-201ENSMUST00000193407 595 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm8458-201ENSMUST00000196658 819 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm7721-201ENSMUST00000200446 546 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm7948-201ENSMUST00000212607 844 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm8106-201ENSMUST00000213123 523 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 AC069561.3-201ENSMUST00000217321 114 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm5457-201ENSMUST00000022260 333 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 AC167140.1-201ENSMUST00000224710 403 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 AC144628.2-201ENSMUST00000227374 352 ntBASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Usp39Q3TIX9 Gm16415-201ENSMUST00000080097 489 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms