Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm13804-201ENSMUST00000119552 172 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm14364-201ENSMUST00000129209 267 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm26153-201ENSMUST00000157433 127 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm22819-201ENSMUST00000157445 303 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm23499-201ENSMUST00000157736 268 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm25982-201ENSMUST00000157920 101 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm3030-201ENSMUST00000163410 516 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm27699-201ENSMUST00000183553 180 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm29229-201ENSMUST00000188874 323 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm29592-201ENSMUST00000189434 370 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm7858-201ENSMUST00000190177 622 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm29332-201ENSMUST00000190829 227 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm5731-201ENSMUST00000190969 481 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm42776-201ENSMUST00000198031 406 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm43142-201ENSMUST00000198670 361 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm43083-201ENSMUST00000199594 476 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm45049-201ENSMUST00000207586 591 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.57□□□□□ -1.68
Col8a1Q00780 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.57□□□□□ -1.68
Col8a1Q00780 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 AC161572.1-201ENSMUST00000227486 640 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 AC154627.3-201ENSMUST00000228441 334 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Col8a1Q00780 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm23627-201ENSMUST00000082459 107 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm22502-201ENSMUST00000082488 107 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm24149-201ENSMUST00000082757 107 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col8a1Q00780 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Col8a1Q00780 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm43169-201ENSMUST00000199544 4734 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Col8a1Q00780 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col8a1Q00780 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col8a1Q00780 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col8a1Q00780 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col8a1Q00780 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col8a1Q00780 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm24170-201ENSMUST00000104124 133 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm23294-201ENSMUST00000104150 164 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm14082-201ENSMUST00000118582 801 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm14930-201ENSMUST00000118864 652 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm11200-201ENSMUST00000121698 448 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm25293-201ENSMUST00000122792 285 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm23534-201ENSMUST00000157539 97 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm22383-201ENSMUST00000158188 327 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm25224-201ENSMUST00000158195 68 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm17538-201ENSMUST00000168236 327 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm21816-201ENSMUST00000179255 360 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm23648-201ENSMUST00000180301 107 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm8816-201ENSMUST00000182280 1163 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm28974-201ENSMUST00000187893 231 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm20923-201ENSMUST00000190009 319 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm42542-201ENSMUST00000197978 268 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm45438-201ENSMUST00000210242 564 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm45402-201ENSMUST00000211796 223 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC4.56□□□□□ -1.68
Col8a1Q00780 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm23506-201ENSMUST00000083077 107 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Mir346-201ENSMUST00000083547 98 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Gm23503-201ENSMUST00000083903 107 ntBASIC4.56□□□□□ -1.68
Col8a1Q00780 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col8a1Q00780 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col8a1Q00780 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col8a1Q00780 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms