Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Gm25314-201ENSMUST00000178810 79 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Gm6055-201ENSMUST00000180532 378 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rfx1P48377 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC6.16□□□□□ -1.42
Rfx1P48377 Gm28700-201ENSMUST00000187614 579 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfx1P48377 Gm5731-201ENSMUST00000190969 481 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.16□□□□□ -1.42
Rfx1P48377 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rfx1P48377 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.16□□□□□ -1.42
Rfx1P48377 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfx1P48377 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfx1P48377 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Gm4017-201ENSMUST00000084813 338 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Rfx1P48377 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Rfx1P48377 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfx1P48377 Gm43924-201ENSMUST00000204851 1736 ntBASIC6.16□□□□□ -1.42
Rfx1P48377 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfx1P48377 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Rfx1P48377 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
Rfx1P48377 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Rfx1P48377 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Rfx1P48377 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.15□□□□□ -1.42
Rfx1P48377 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rfx1P48377 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Rfx1P48377 AC139754.3-201ENSMUST00000220444 1627 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC6.15□□□□□ -1.42
Rfx1P48377 Mir879-201ENSMUST00000104703 76 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm11486-201ENSMUST00000107322 478 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm14594-201ENSMUST00000118052 537 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm14566-201ENSMUST00000118915 321 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm14590-201ENSMUST00000118934 537 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm14520-201ENSMUST00000119258 387 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm12294-201ENSMUST00000119723 490 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm13239-201ENSMUST00000119920 637 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm25666-201ENSMUST00000157702 107 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm22326-201ENSMUST00000158897 351 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm14596-201ENSMUST00000180268 537 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm14595-201ENSMUST00000180335 537 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rfx1P48377 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC6.15□□□□□ -1.42
Rfx1P48377 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm27688-201ENSMUST00000183634 91 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm5734-201ENSMUST00000189787 913 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC6.15□□□□□ -1.42
Rfx1P48377 Gm43407-201ENSMUST00000199816 317 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.15□□□□□ -1.42
Rfx1P48377 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.15□□□□□ -1.42
Rfx1P48377 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Rfx1P48377 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rfx1P48377 Gm18507-201ENSMUST00000218855 525 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 AC132954.1-201ENSMUST00000221017 342 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Rfx1P48377 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Rfx1P48377 Olfr203-201ENSMUST00000089305 924 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Gm22365-201ENSMUST00000093750 117 ntBASIC6.15□□□□□ -1.42
Rfx1P48377 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rfx1P48377 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Rfx1P48377 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Rfx1P48377 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Rfx1P48377 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Rfx1P48377 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rfx1P48377 Gm37558-201ENSMUST00000193684 2983 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm22266-201ENSMUST00000104011 138 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC6.14□□□□□ -1.43
Rfx1P48377 Gm12285-201ENSMUST00000117347 233 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm14469-201ENSMUST00000118363 202 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm13772-201ENSMUST00000118431 317 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm23964-201ENSMUST00000157966 107 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.14□□□□□ -1.43
Rfx1P48377 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rfx1P48377 Gm20773-201ENSMUST00000178940 681 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rfx1P48377 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rfx1P48377 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rfx1P48377 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rfx1P48377 Gm18828-202ENSMUST00000181035 310 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm27528-201ENSMUST00000183544 205 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Mir7020-201ENSMUST00000183787 70 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Mir7235-201ENSMUST00000183796 56 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Mir7037-201ENSMUST00000184414 65 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC6.14□□□□□ -1.43
Rfx1P48377 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC6.14□□□□□ -1.43
Rfx1P48377 Gm2325-201ENSMUST00000186637 581 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC6.14□□□□□ -1.43
Rfx1P48377 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC6.14□□□□□ -1.43
Rfx1P48377 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC6.14□□□□□ -1.43
Rfx1P48377 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC6.14□□□□□ -1.43
Rfx1P48377 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC6.14□□□□□ -1.43
Rfx1P48377 Gm37609-201ENSMUST00000191778 678 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm37308-201ENSMUST00000194684 100 ntBASIC6.14□□□□□ -1.43
Rfx1P48377 Gm38019-201ENSMUST00000195133 380 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms