Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Traf1P39428 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.7□□□□□ -1.66
Traf1P39428 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC4.7□□□□□ -1.66
Traf1P39428 Gm38332-201ENSMUST00000194189 147 ntBASIC4.7□□□□□ -1.66
Traf1P39428 Mir129b-201ENSMUST00000197461 65 ntBASIC4.7□□□□□ -1.66
Traf1P39428 Gm43494-201ENSMUST00000197672 388 ntBASIC4.7□□□□□ -1.66
Traf1P39428 Gm3010-201ENSMUST00000198805 448 ntBASIC4.7□□□□□ -1.66
Traf1P39428 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Traf1P39428 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Traf1P39428 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Traf1P39428 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Traf1P39428 Gm26437-201ENSMUST00000082595 105 ntBASIC4.7□□□□□ -1.66
Traf1P39428 Gm22868-201ENSMUST00000083955 164 ntBASIC4.7□□□□□ -1.66
Traf1P39428 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Traf1P39428 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
Traf1P39428 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Traf1P39428 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Traf1P39428 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Traf1P39428 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.7□□□□□ -1.66
Traf1P39428 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.7□□□□□ -1.66
Traf1P39428 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Traf1P39428 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Traf1P39428 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Traf1P39428 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Traf1P39428 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Traf1P39428 Gm15151-201ENSMUST00000117106 177 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm15180-201ENSMUST00000117745 492 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm14282-201ENSMUST00000119484 240 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm14586-201ENSMUST00000119571 408 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm11260-201ENSMUST00000121163 942 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm15488-201ENSMUST00000121682 670 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.69□□□□□ -1.66
Traf1P39428 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC4.69□□□□□ -1.66
Traf1P39428 Gm23098-201ENSMUST00000157552 299 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm23365-201ENSMUST00000175019 125 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm25960-201ENSMUST00000175110 125 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm44453-201ENSMUST00000175161 126 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Mir1251-201ENSMUST00000175486 84 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm25195-201ENSMUST00000177656 126 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm8498-201ENSMUST00000188227 974 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm5368-201ENSMUST00000189012 589 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm28267-201ENSMUST00000191093 265 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm18547-201ENSMUST00000192439 811 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm38061-201ENSMUST00000192490 365 ntBASIC4.69□□□□□ -1.66
Traf1P39428 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Mir7682-201ENSMUST00000198467 58 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm7041-201ENSMUST00000201227 524 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Gm44681-201ENSMUST00000208447 842 ntBASIC4.69□□□□□ -1.66
Traf1P39428 AC132833.3-201ENSMUST00000227472 866 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Traf1P39428 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Traf1P39428 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Traf1P39428 Gm7099-201ENSMUST00000080066 554 ntBASIC4.69□□□□□ -1.66
Traf1P39428 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Traf1P39428 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Traf1P39428 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Traf1P39428 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.68□□□□□ -1.66
Traf1P39428 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Traf1P39428 Gm42967-201ENSMUST00000198647 2312 ntBASIC4.68□□□□□ -1.66
Traf1P39428 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.68□□□□□ -1.66
Traf1P39428 Gm11262-201ENSMUST00000119326 833 ntBASIC4.68□□□□□ -1.66
Traf1P39428 Gm1866-201ENSMUST00000120701 477 ntBASIC4.68□□□□□ -1.66
Traf1P39428 Gm7618-201ENSMUST00000121643 171 ntBASIC4.68□□□□□ -1.66
Traf1P39428 Gm24875-201ENSMUST00000158888 104 ntBASIC4.68□□□□□ -1.66
Traf1P39428 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC4.68□□□□□ -1.66
Traf1P39428 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Traf1P39428 Gm25944-201ENSMUST00000178758 94 ntBASIC4.68□□□□□ -1.66
Traf1P39428 Gm38098-201ENSMUST00000194115 241 ntBASIC4.68□□□□□ -1.66
Traf1P39428 Gm17887-201ENSMUST00000200194 547 ntBASIC4.68□□□□□ -1.66
Traf1P39428 CT009764.1-201ENSMUST00000222260 483 ntBASIC4.68□□□□□ -1.66
Traf1P39428 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC4.68□□□□□ -1.66
Traf1P39428 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Traf1P39428 Mir132-201ENSMUST00000083603 66 ntBASIC4.68□□□□□ -1.66
Traf1P39428 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Traf1P39428 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Traf1P39428 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.68□□□□□ -1.66
Traf1P39428 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.68□□□□□ -1.66
Traf1P39428 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Traf1P39428 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Traf1P39428 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
Traf1P39428 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.67□□□□□ -1.66
Traf1P39428 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.67□□□□□ -1.66
Traf1P39428 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
Traf1P39428 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Traf1P39428 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Traf1P39428 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Traf1P39428 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Traf1P39428 Gm23322-201ENSMUST00000104464 167 ntBASIC4.67□□□□□ -1.66
Traf1P39428 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Traf1P39428 Gm15126-201ENSMUST00000118631 833 ntBASIC4.67□□□□□ -1.66
Traf1P39428 Gm15364-201ENSMUST00000119618 585 ntBASIC4.67□□□□□ -1.66
Traf1P39428 Gm22986-201ENSMUST00000122753 130 ntBASIC4.67□□□□□ -1.66
Traf1P39428 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.67□□□□□ -1.66
Traf1P39428 Gm16331-201ENSMUST00000144274 498 ntBASIC4.67□□□□□ -1.66
Traf1P39428 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.67□□□□□ -1.66
Traf1P39428 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.67□□□□□ -1.66
Traf1P39428 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms