Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm19441-201ENSMUST00000221545 330 ntBASIC4.81□□□□□ -1.64
LdlrP35951 AC192333.2-201ENSMUST00000224771 196 ntBASIC4.81□□□□□ -1.64
LdlrP35951 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Gm5045-201ENSMUST00000027054 810 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LdlrP35951 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LdlrP35951 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LdlrP35951 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
LdlrP35951 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LdlrP35951 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.8□□□□□ -1.64
LdlrP35951 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LdlrP35951 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LdlrP35951 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
LdlrP35951 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LdlrP35951 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LdlrP35951 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LdlrP35951 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LdlrP35951 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LdlrP35951 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LdlrP35951 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LdlrP35951 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LdlrP35951 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LdlrP35951 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Gm22899-201ENSMUST00000104540 131 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Gm12328-201ENSMUST00000118611 197 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LdlrP35951 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.8□□□□□ -1.64
LdlrP35951 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
LdlrP35951 Mup-ps2-201ENSMUST00000142602 533 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Gm23534-201ENSMUST00000157539 97 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Gm22601-201ENSMUST00000157595 250 ntBASIC4.8□□□□□ -1.64
LdlrP35951 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
LdlrP35951 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LdlrP35951 Gm19932-201ENSMUST00000177033 313 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.8□□□□□ -1.64
LdlrP35951 Gm27013-201ENSMUST00000182441 1024 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Gm27976-201ENSMUST00000183635 162 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.8□□□□□ -1.64
LdlrP35951 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LdlrP35951 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LdlrP35951 Igkv15-97-201ENSMUST00000197637 339 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC4.8□□□□□ -1.64
LdlrP35951 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.8□□□□□ -1.64
LdlrP35951 Olfr151-202ENSMUST00000221099 929 ntBASIC4.8□□□□□ -1.64
LdlrP35951 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LdlrP35951 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LdlrP35951 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LdlrP35951 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.8□□□□□ -1.64
LdlrP35951 Gm25079-201ENSMUST00000082529 203 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Gm22364-201ENSMUST00000083097 98 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LdlrP35951 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LdlrP35951 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LdlrP35951 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LdlrP35951 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
LdlrP35951 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LdlrP35951 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
LdlrP35951 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.8□□□□□ -1.64
LdlrP35951 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LdlrP35951 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LdlrP35951 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LdlrP35951 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.79□□□□□ -1.64
LdlrP35951 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LdlrP35951 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LdlrP35951 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LdlrP35951 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
LdlrP35951 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
LdlrP35951 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LdlrP35951 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LdlrP35951 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LdlrP35951 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LdlrP35951 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.79□□□□□ -1.64
LdlrP35951 Gm24125-201ENSMUST00000104105 137 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm14670-201ENSMUST00000117327 337 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm12878-201ENSMUST00000118744 332 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm13213-201ENSMUST00000119668 474 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm13170-201ENSMUST00000119716 643 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm14516-201ENSMUST00000120012 252 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm14678-201ENSMUST00000121396 482 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm24385-201ENSMUST00000122694 350 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.79□□□□□ -1.64
LdlrP35951 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.79□□□□□ -1.64
LdlrP35951 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LdlrP35951 Gm3531-201ENSMUST00000162698 489 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LdlrP35951 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LdlrP35951 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LdlrP35951 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LdlrP35951 Gm25874-201ENSMUST00000178030 79 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC4.79□□□□□ -1.64
LdlrP35951 Mir6416-201ENSMUST00000183664 117 ntBASIC4.79□□□□□ -1.64
LdlrP35951 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms