Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Zakit-201ENSMUST00000157677 308 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm25923-201ENSMUST00000158312 138 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm23583-201ENSMUST00000158533 289 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm6155-201ENSMUST00000173735 341 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Mir6960-201ENSMUST00000183449 61 ntBASIC4.19□□□□□ -1.74
Lire1P11260 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Lire1P11260 Gm37272-201ENSMUST00000193401 488 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm36259-201ENSMUST00000197340 392 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.19□□□□□ -1.74
Lire1P11260 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm18877-201ENSMUST00000207706 539 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm6240-201ENSMUST00000208014 473 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
Lire1P11260 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC4.19□□□□□ -1.74
Lire1P11260 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC4.19□□□□□ -1.74
Lire1P11260 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Lire1P11260 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Lire1P11260 Gm6043-201ENSMUST00000099961 492 ntBASIC4.19□□□□□ -1.74
Lire1P11260 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Lire1P11260 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Lire1P11260 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Lire1P11260 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Lire1P11260 AC164297.4-201ENSMUST00000224225 1307 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Lire1P11260 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Lire1P11260 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Lire1P11260 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Lire1P11260 Anp32-ps-201ENSMUST00000118265 388 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Gm14627-201ENSMUST00000118931 567 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Gm12893-201ENSMUST00000121732 275 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.18□□□□□ -1.74
Lire1P11260 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.18□□□□□ -1.74
Lire1P11260 Gm24898-201ENSMUST00000158133 106 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
Lire1P11260 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.18□□□□□ -1.74
Lire1P11260 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Lire1P11260 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Lire1P11260 Gm8221-201ENSMUST00000178052 564 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.18□□□□□ -1.74
Lire1P11260 Gm20574-201ENSMUST00000182867 917 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Gm27805-201ENSMUST00000184513 79 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Gm29138-201ENSMUST00000191444 348 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Gm8242-202ENSMUST00000193056 475 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Lire1P11260 Gm43239-201ENSMUST00000200131 201 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Gm44076-201ENSMUST00000203072 520 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Gm45209-201ENSMUST00000207122 353 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Gm45316-201ENSMUST00000210128 162 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Lire1P11260 Zmym2-202ENSMUST00000223669 1281 ntBASIC4.18□□□□□ -1.74
Lire1P11260 AC107663.3-201ENSMUST00000225873 601 ntBASIC4.18□□□□□ -1.74
Lire1P11260 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.18□□□□□ -1.74
Lire1P11260 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Lire1P11260 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Lire1P11260 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Lire1P11260 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Lire1P11260 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Lire1P11260 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.18□□□□□ -1.74
Lire1P11260 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
Lire1P11260 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.18□□□□□ -1.74
Lire1P11260 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Lire1P11260 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Lire1P11260 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Lire1P11260 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Lire1P11260 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.17□□□□□ -1.74
Lire1P11260 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Lire1P11260 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Lire1P11260 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Lire1P11260 Gm23322-201ENSMUST00000104464 167 ntBASIC4.17□□□□□ -1.74
Lire1P11260 Gm14628-201ENSMUST00000117508 635 ntBASIC4.17□□□□□ -1.74
Lire1P11260 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.17□□□□□ -1.74
Lire1P11260 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.17□□□□□ -1.74
Lire1P11260 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.17□□□□□ -1.74
Lire1P11260 Gm22940-201ENSMUST00000158560 155 ntBASIC4.17□□□□□ -1.74
Lire1P11260 Gm16303-201ENSMUST00000161498 390 ntBASIC4.17□□□□□ -1.74
Lire1P11260 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Lire1P11260 Gm21960-201ENSMUST00000181924 452 ntBASIC4.17□□□□□ -1.74
Lire1P11260 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.17□□□□□ -1.74
Lire1P11260 Mir3620-201ENSMUST00000184710 61 ntBASIC4.17□□□□□ -1.74
Lire1P11260 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.17□□□□□ -1.74
Lire1P11260 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC4.17□□□□□ -1.74
Lire1P11260 Gm43441-201ENSMUST00000201458 205 ntBASIC4.17□□□□□ -1.74
Lire1P11260 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC4.17□□□□□ -1.74
Lire1P11260 Gm44779-201ENSMUST00000206937 708 ntBASIC4.17□□□□□ -1.74
Lire1P11260 Gm45458-201ENSMUST00000209900 522 ntBASIC4.17□□□□□ -1.74
Lire1P11260 Gm18645-202ENSMUST00000212222 760 ntBASIC4.17□□□□□ -1.74
Lire1P11260 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Lire1P11260 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Lire1P11260 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.17□□□□□ -1.74
Lire1P11260 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.17□□□□□ -1.74
Lire1P11260 AC154426.1-201ENSMUST00000225614 1132 ntBASIC4.17□□□□□ -1.74
Lire1P11260 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.17□□□□□ -1.74
Lire1P11260 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Lire1P11260 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms