Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm38128-201ENSMUST00000192085 3250 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxd3P09027 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC4.81□□□□□ -1.64
Hoxd3P09027 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm24434-201ENSMUST00000104081 132 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm8692-201ENSMUST00000118102 438 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm11976-201ENSMUST00000119236 295 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm13818-201ENSMUST00000119441 511 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm12115-201ENSMUST00000119969 447 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm15781-201ENSMUST00000120216 323 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm6062-201ENSMUST00000120462 631 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm12890-201ENSMUST00000120885 373 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm24997-201ENSMUST00000157910 105 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm25654-201ENSMUST00000158467 88 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm25714-201ENSMUST00000158626 296 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm27512-201ENSMUST00000175328 126 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm27470-201ENSMUST00000184070 210 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm42623-201ENSMUST00000197225 379 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm9292-201ENSMUST00000222008 710 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm33312-201ENSMUST00000222443 332 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 AC164426.1-201ENSMUST00000225745 929 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm44215-201ENSMUST00000204910 2711 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC4.81□□□□□ -1.64
Hoxd3P09027 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hoxd3P09027 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxd3P09027 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Abcc2-202ENSMUST00000099413 1926 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxd3P09027 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm43180-201ENSMUST00000197541 2886 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxd3P09027 Gm42819-201ENSMUST00000199630 5121 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxd3P09027 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.81□□□□□ -1.64
Hoxd3P09027 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Hoxd3P09027 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm43611-201ENSMUST00000196656 4352 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC4.8□□□□□ -1.64
Hoxd3P09027 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC4.8□□□□□ -1.64
Hoxd3P09027 AC133079.1-201ENSMUST00000220943 1881 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Hoxd3P09027 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Hoxd3P09027 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm11576-201ENSMUST00000117433 417 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm8880-201ENSMUST00000121800 454 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm24629-201ENSMUST00000122762 89 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm25624-201ENSMUST00000157222 275 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm23209-201ENSMUST00000158667 110 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm25486-201ENSMUST00000158726 63 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm10075-201ENSMUST00000162030 545 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm24968-201ENSMUST00000179817 107 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC4.8□□□□□ -1.64
Hoxd3P09027 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm20257-202ENSMUST00000188643 130 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC4.8□□□□□ -1.64
Hoxd3P09027 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm37511-201ENSMUST00000192901 294 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm34768-201ENSMUST00000193884 565 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm43392-201ENSMUST00000196560 434 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm44312-201ENSMUST00000203536 469 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 AC108846.4-201ENSMUST00000216783 341 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm11360-201ENSMUST00000221898 262 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Gm10095-201ENSMUST00000222765 483 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 AC159205.4-201ENSMUST00000225964 704 ntBASIC4.8□□□□□ -1.64
Hoxd3P09027 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Hoxd3P09027 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Hoxd3P09027 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd3P09027 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms