Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC4.27□□□□□ -1.73
Cbx4O55187 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cbx4O55187 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.27□□□□□ -1.73
Cbx4O55187 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cbx4O55187 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.27□□□□□ -1.73
Cbx4O55187 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Cbx4O55187 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Cbx4O55187 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cbx4O55187 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cbx4O55187 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cbx4O55187 Synpr-207ENSMUST00000223583 3362 ntBASIC4.27□□□□□ -1.73
Cbx4O55187 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.27□□□□□ -1.73
Cbx4O55187 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cbx4O55187 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cbx4O55187 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cbx4O55187 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cbx4O55187 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cbx4O55187 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cbx4O55187 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cbx4O55187 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cbx4O55187 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cbx4O55187 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cbx4O55187 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Cbx4O55187 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cbx4O55187 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cbx4O55187 Gm14385-201ENSMUST00000116315 876 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Gm22091-201ENSMUST00000116908 127 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Gm13607-201ENSMUST00000117875 539 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Gm12225-201ENSMUST00000117995 298 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Gm14945-201ENSMUST00000119556 1118 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cbx4O55187 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Gm24517-201ENSMUST00000122560 107 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.26□□□□□ -1.73
Cbx4O55187 Gm23824-201ENSMUST00000158741 276 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Gm18128-201ENSMUST00000172625 511 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Gm27896-201ENSMUST00000175162 317 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cbx4O55187 Mir669a-7-201ENSMUST00000180364 87 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Gm4842-201ENSMUST00000183237 835 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cbx4O55187 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cbx4O55187 Gm29097-201ENSMUST00000190273 422 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cbx4O55187 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC4.26□□□□□ -1.73
Cbx4O55187 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.26□□□□□ -1.73
Cbx4O55187 Mir669a-6-201ENSMUST00000196127 87 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Mir669a-12-201ENSMUST00000197274 87 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Mir669a-5-201ENSMUST00000197439 87 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Mir669a-10-201ENSMUST00000197745 87 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Mir669a-11-201ENSMUST00000197952 87 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Mir669a-4-201ENSMUST00000198665 87 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Gm43171-201ENSMUST00000199882 291 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Mir669a-9-201ENSMUST00000200087 87 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Mir669a-8-201ENSMUST00000200268 87 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
Cbx4O55187 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cbx4O55187 Gm44002-201ENSMUST00000205134 594 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 AC113031.2-201ENSMUST00000226132 579 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cbx4O55187 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cbx4O55187 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cbx4O55187 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cbx4O55187 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cbx4O55187 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cbx4O55187 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.26□□□□□ -1.73
Cbx4O55187 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.26□□□□□ -1.73
Cbx4O55187 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cbx4O55187 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cbx4O55187 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cbx4O55187 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cbx4O55187 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cbx4O55187 Gm43498-201ENSMUST00000202002 1486 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cbx4O55187 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Cbx4O55187 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cbx4O55187 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.25□□□□□ -1.73
Cbx4O55187 Gm12261-201ENSMUST00000117499 645 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Gm12311-201ENSMUST00000118803 374 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Gm15030-201ENSMUST00000119804 484 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Gm12087-201ENSMUST00000121878 258 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cbx4O55187 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.25□□□□□ -1.73
Cbx4O55187 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Gm23906-201ENSMUST00000157573 128 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Gm26393-201ENSMUST00000157625 129 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Gm24532-201ENSMUST00000157951 286 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Gm22536-201ENSMUST00000158171 134 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cbx4O55187 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cbx4O55187 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.25□□□□□ -1.73
Cbx4O55187 Mir6418-201ENSMUST00000185075 115 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Gm28412-201ENSMUST00000187243 177 ntBASIC4.25□□□□□ -1.73
Cbx4O55187 Gm28872-201ENSMUST00000191518 158 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 125.1 ms