Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm20526-201ENSMUST00000173416 158 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm20399-201ENSMUST00000174652 132 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Hmgb3O54879 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm28030-201ENSMUST00000184987 138 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm36934-201ENSMUST00000192007 306 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm37698-201ENSMUST00000192605 463 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm8790-201ENSMUST00000194108 322 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm44403-201ENSMUST00000198554 129 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm44099-201ENSMUST00000203299 112 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm7468-201ENSMUST00000203900 652 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm7530-201ENSMUST00000218466 605 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm18388-201ENSMUST00000222339 557 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 AC096628.1-201ENSMUST00000226060 641 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm5518-201ENSMUST00000084171 648 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Hmgb3O54879 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
Hmgb3O54879 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
Hmgb3O54879 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Hmgb3O54879 CT025577.1-201ENSMUST00000220862 2846 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm21034-201ENSMUST00000207390 2608 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm21035-201ENSMUST00000207867 2608 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC2.86□□□□□ -1.95
Hmgb3O54879 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Hmgb3O54879 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Hmgb3O54879 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm14050-201ENSMUST00000117052 346 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm15195-201ENSMUST00000118775 263 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm11483-201ENSMUST00000119839 247 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm25967-201ENSMUST00000157168 147 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm26312-201ENSMUST00000157769 165 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm23782-201ENSMUST00000157939 120 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm23583-201ENSMUST00000158533 289 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm2950-201ENSMUST00000185530 520 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC2.86□□□□□ -1.95
Hmgb3O54879 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm37857-201ENSMUST00000191784 1199 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm37828-201ENSMUST00000192496 432 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm42814-201ENSMUST00000199370 460 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm8703-201ENSMUST00000203793 730 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm18791-201ENSMUST00000204611 726 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm18193-201ENSMUST00000210017 772 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 AC134537.2-201ENSMUST00000217770 575 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Hmgb3O54879 AC157572.3-201ENSMUST00000227288 303 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Hmgb3O54879 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Hmgb3O54879 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Hmgb3O54879 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm19335-201ENSMUST00000195836 2069 ntBASIC2.86□□□□□ -1.95
Hmgb3O54879 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Hmgb3O54879 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Hmgb3O54879 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Hmgb3O54879 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Hmgb3O54879 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Hmgb3O54879 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm12287-201ENSMUST00000119770 707 ntBASIC2.85□□□□□ -1.95
Hmgb3O54879 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Hmgb3O54879 Mir5134-201ENSMUST00000175529 78 ntBASIC2.85□□□□□ -1.95
Hmgb3O54879 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Hmgb3O54879 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms