Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm22840-201ENSMUST00000158444 136 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 Gm22890-201ENSMUST00000158642 144 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cx3cl1O35188 Gm20399-201ENSMUST00000174652 132 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 Gm27718-201ENSMUST00000183721 86 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.42□□□□□ -1.86
Cx3cl1O35188 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 Gm38234-201ENSMUST00000195204 421 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 Gm18445-201ENSMUST00000195502 774 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.42□□□□□ -1.86
Cx3cl1O35188 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC3.42□□□□□ -1.86
Cx3cl1O35188 Gm44611-201ENSMUST00000207507 355 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 Gm18672-201ENSMUST00000208035 270 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC3.42□□□□□ -1.86
Cx3cl1O35188 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 AC132260.2-201ENSMUST00000224482 344 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 AC151907.1-201ENSMUST00000228812 412 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 Gm12582-201ENSMUST00000030555 697 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cx3cl1O35188 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cx3cl1O35188 Snord15a-201ENSMUST00000083888 148 ntBASIC3.42□□□□□ -1.86
Cx3cl1O35188 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Cx3cl1O35188 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cx3cl1O35188 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Cx3cl1O35188 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cx3cl1O35188 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cx3cl1O35188 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm26075-201ENSMUST00000104062 121 ntBASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm13650-201ENSMUST00000117729 433 ntBASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm11869-201ENSMUST00000118701 329 ntBASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm4910-201ENSMUST00000119605 366 ntBASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm24059-201ENSMUST00000157493 312 ntBASIC3.41□□□□□ -1.86
Cx3cl1O35188 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm27033-201ENSMUST00000183226 544 ntBASIC3.41□□□□□ -1.86
Cx3cl1O35188 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm37698-201ENSMUST00000192605 463 ntBASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm37617-201ENSMUST00000194309 159 ntBASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.41□□□□□ -1.86
Cx3cl1O35188 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm8703-201ENSMUST00000203793 730 ntBASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm34779-201ENSMUST00000210036 263 ntBASIC3.41□□□□□ -1.86
Cx3cl1O35188 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm7034-201ENSMUST00000218638 645 ntBASIC3.41□□□□□ -1.86
Cx3cl1O35188 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cx3cl1O35188 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Cx3cl1O35188 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Cx3cl1O35188 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Cx3cl1O35188 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.4□□□□□ -1.86
Cx3cl1O35188 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Cx3cl1O35188 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm12294-201ENSMUST00000119723 490 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm16005-201ENSMUST00000120515 269 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm14905-201ENSMUST00000122351 639 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm25105-201ENSMUST00000122477 130 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm2892-201ENSMUST00000145537 711 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm24998-201ENSMUST00000157908 89 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm10074-201ENSMUST00000174543 249 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm27903-201ENSMUST00000175482 126 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm27773-201ENSMUST00000184087 78 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm8600-201ENSMUST00000186320 905 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm38330-201ENSMUST00000192743 959 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Trbv8-201ENSMUST00000194020 285 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Mir142-201ENSMUST00000198092 64 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm8748-201ENSMUST00000211125 587 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm18120-201ENSMUST00000220079 511 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm4036-201ENSMUST00000220842 626 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Cx3cl1O35188 Gm7119-201ENSMUST00000221345 695 ntBASIC3.4□□□□□ -1.87
Cx3cl1O35188 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms