Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Scn3aA2ASI5 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Scn3aA2ASI5 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Scn3aA2ASI5 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Gm12288-201ENSMUST00000121054 1282 ntBASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Gm22718-201ENSMUST00000122701 315 ntBASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Gm22361-201ENSMUST00000158435 176 ntBASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Gm17711-201ENSMUST00000172028 237 ntBASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Gm27374-201ENSMUST00000183660 81 ntBASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Mir6398-201ENSMUST00000184541 102 ntBASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.8□□□□□ -1.8
Scn3aA2ASI5 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Gm35876-201ENSMUST00000205044 459 ntBASIC3.8□□□□□ -1.8
Scn3aA2ASI5 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Gm35405-201ENSMUST00000218754 400 ntBASIC3.8□□□□□ -1.8
Scn3aA2ASI5 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scn3aA2ASI5 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm12118-201ENSMUST00000119766 532 ntBASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm15190-201ENSMUST00000120855 276 ntBASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm23391-201ENSMUST00000157579 104 ntBASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm19030-201ENSMUST00000194947 552 ntBASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.79□□□□□ -1.8
Scn3aA2ASI5 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm9845-201ENSMUST00000056409 598 ntBASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Scn3aA2ASI5 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Gm17421-201ENSMUST00000167845 674 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Gm28614-201ENSMUST00000186483 458 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Gm28923-201ENSMUST00000187755 322 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Gm28069-201ENSMUST00000189926 214 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Gm36994-201ENSMUST00000192941 492 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Gm43217-201ENSMUST00000199513 367 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Gm43899-201ENSMUST00000203675 246 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Gm18644-201ENSMUST00000211458 815 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Gm45735-201ENSMUST00000212779 319 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 AC105169.1-201ENSMUST00000218912 1294 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Scn3aA2ASI5 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Scn3aA2ASI5 Gm11708-201ENSMUST00000119530 832 ntBASIC3.78□□□□□ -1.81
Scn3aA2ASI5 Gm13788-201ENSMUST00000120767 601 ntBASIC3.78□□□□□ -1.81
Scn3aA2ASI5 Gm12412-201ENSMUST00000121867 328 ntBASIC3.78□□□□□ -1.81
Scn3aA2ASI5 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
Scn3aA2ASI5 Gm6947-201ENSMUST00000186254 78 ntBASIC3.78□□□□□ -1.81
Scn3aA2ASI5 Gm45789-201ENSMUST00000213038 364 ntBASIC3.78□□□□□ -1.81
Scn3aA2ASI5 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC3.78□□□□□ -1.81
Scn3aA2ASI5 Gm18363-201ENSMUST00000221671 730 ntBASIC3.78□□□□□ -1.81
Scn3aA2ASI5 Gm22043-201ENSMUST00000082993 158 ntBASIC3.78□□□□□ -1.81
Scn3aA2ASI5 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC3.78□□□□□ -1.81
Scn3aA2ASI5 Gm42455-201ENSMUST00000199761 2736 ntBASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.77□□□□□ -1.81
Scn3aA2ASI5 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Gm8402-201ENSMUST00000118183 1770 ntBASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Gm8383-201ENSMUST00000121179 1770 ntBASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Gm24541-201ENSMUST00000103871 96 ntBASIC3.77□□□□□ -1.81
Scn3aA2ASI5 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Gm14791-201ENSMUST00000119061 1166 ntBASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Gm24382-201ENSMUST00000122698 107 ntBASIC3.77□□□□□ -1.81
Scn3aA2ASI5 Gm24739-201ENSMUST00000158855 292 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms