Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm44319-201ENSMUST00000196974 93 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm9710-201ENSMUST00000198053 499 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm7825-201ENSMUST00000204046 416 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm45403-201ENSMUST00000209453 276 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC5.79□□□□□ -1.48
Nubp1Q9R060 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm23677-201ENSMUST00000083156 104 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm26066-201ENSMUST00000083385 109 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nubp1Q9R060 CT010470.1-201ENSMUST00000225364 1876 ntBASIC5.79□□□□□ -1.48
Nubp1Q9R060 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nubp1Q9R060 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Gm24989-201ENSMUST00000104461 88 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Gm7312-201ENSMUST00000118798 469 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 Gm14877-201ENSMUST00000119803 478 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Gm24348-201ENSMUST00000158710 130 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Mir6336-201ENSMUST00000183581 130 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Gm44361-201ENSMUST00000197960 94 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Gm18600-201ENSMUST00000207205 505 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.78□□□□□ -1.48
Nubp1Q9R060 AC171206.2-201ENSMUST00000215252 389 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC5.78□□□□□ -1.48
Nubp1Q9R060 AC158750.1-201ENSMUST00000226163 634 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Gm26163-201ENSMUST00000083792 178 ntBASIC5.78□□□□□ -1.48
Nubp1Q9R060 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nubp1Q9R060 Gm45131-201ENSMUST00000208051 2582 ntBASIC5.77□□□□□ -1.49
Nubp1Q9R060 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nubp1Q9R060 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nubp1Q9R060 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nubp1Q9R060 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.77□□□□□ -1.49
Nubp1Q9R060 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nubp1Q9R060 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nubp1Q9R060 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nubp1Q9R060 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC5.77□□□□□ -1.49
Nubp1Q9R060 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm24951-201ENSMUST00000102182 109 ntBASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm25795-201ENSMUST00000104421 132 ntBASIC5.77□□□□□ -1.49
Nubp1Q9R060 Snora35-201ENSMUST00000104579 128 ntBASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm22371-201ENSMUST00000104588 130 ntBASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm14733-201ENSMUST00000117680 133 ntBASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm14971-201ENSMUST00000117980 663 ntBASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm14694-201ENSMUST00000121856 282 ntBASIC5.77□□□□□ -1.49
Nubp1Q9R060 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm22113-201ENSMUST00000158343 104 ntBASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm21816-201ENSMUST00000179255 360 ntBASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm27152-201ENSMUST00000183828 99 ntBASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm44092-201ENSMUST00000204470 258 ntBASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm45448-201ENSMUST00000211739 209 ntBASIC5.77□□□□□ -1.49
Nubp1Q9R060 Gm45899-201ENSMUST00000212196 1276 ntBASIC5.77□□□□□ -1.49
Nubp1Q9R060 Snora44-201ENSMUST00000082670 129 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms