Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm5757-201ENSMUST00000117494 528 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm11600-201ENSMUST00000119592 240 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm12578-201ENSMUST00000121244 417 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm11982-201ENSMUST00000121480 314 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm22204-201ENSMUST00000122654 327 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm25369-201ENSMUST00000158848 132 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm23365-201ENSMUST00000175019 125 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm25960-201ENSMUST00000175110 125 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm44453-201ENSMUST00000175161 126 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm26219-201ENSMUST00000175216 71 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm25195-201ENSMUST00000177656 126 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm27733-201ENSMUST00000184803 68 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm18529-201ENSMUST00000193025 1257 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm37001-201ENSMUST00000193377 190 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm44650-201ENSMUST00000206929 194 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm18644-201ENSMUST00000211458 815 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm23256-201ENSMUST00000102235 110 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm26140-201ENSMUST00000103807 110 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm25765-201ENSMUST00000104100 132 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm12982-201ENSMUST00000117408 190 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm14119-201ENSMUST00000119511 235 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm11483-201ENSMUST00000119839 247 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm13459-201ENSMUST00000121558 646 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm5924-201ENSMUST00000132554 871 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm22908-201ENSMUST00000177620 110 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm22897-201ENSMUST00000197860 128 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm18611-201ENSMUST00000200334 1118 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm45553-201ENSMUST00000209929 507 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm18016-201ENSMUST00000216119 801 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.55□□□□□ -1.84
Lima1Q9ERG0 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Gm13058-201ENSMUST00000117097 1435 ntBASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Gm23271-201ENSMUST00000104052 124 ntBASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Gm23532-201ENSMUST00000104569 112 ntBASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Gm11404-201ENSMUST00000120872 494 ntBASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Gm8498-201ENSMUST00000188227 974 ntBASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Mir5121-201ENSMUST00000198528 74 ntBASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Gm42453-201ENSMUST00000200477 409 ntBASIC3.54□□□□□ -1.84
Lima1Q9ERG0 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.54□□□□□ -1.84
Lima1Q9ERG0 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.54□□□□□ -1.84
Lima1Q9ERG0 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.54□□□□□ -1.84
Lima1Q9ERG0 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Lima1Q9ERG0 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms